Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2107 ATGAAAGAGAATAACAACTATTTACCTTCCTTGCCGCTACTATTCTGCTGCTGTGTTCTCTTGTGCCTGGCAGAGTCAGCAGATAACGACAATAACAATAATAATAATGAAGTTTATATAGTATATATGGGAGCCGCGGATTCAACAAATGCATCCCTTCGTAATGATCATGCTCGTGTTCTCAACTTGGTCTTAAAAAGGAATGAGAAGGCTCTAGTACAGAACTACAAGCATGGATTCTCGGGTTTTGCGGCTCATCTATCAAAGGAAGAAGCGGAGTCAATAGCTCAGAAACCAGGAGTGGTATCTGTGTTCCCTGATCCCATTCTGAAGCTTCACACAACACGTTCATGGGAGTTCCTCAAGTATCAAACTCAAGTCAAAATCGATTCTCTCCCAACCGCCGCAAATTCTCAGTCATCAGACACCATCATTGGCATCTTAGACACAGGTATATGGCCAGAGGCGGAAAGTTTCGTGGACACGGGCATGGATCCTGTTCCATCCCGTTGGAAGGGTACCTGCATGAAATCGACAGATTTCAATTCATCCAACTGCAACAGGAAGATAATTGGAGCGAGGTATTATGCAGACCCTAATGGGGGTAATGACGGGGATAACACAGCAAGAGATTCCAATGGCCATGGGACTCACGTCTCGTCCACGGCGGCGGGTGTCAACGTCGCAAATGTATCCTTCTACGGTCTGGCGGAGGGGACTGCCGTCGGTGGCTCCCCACAATCCCGATTGGCAATGTACAGAGTGTGCACCAACTTCGGGTGCCGGGGCTCCGCCATCCTCGCCGGCTTTGACGATGCAATCAACGACGGCGTCGACGTGCTGTCTCTCTCACTTGGATCGCCGTCAGTGCTCCGACCAGACCTCACATCCGATCCCATTGCCATCGGATCGTTCCACGCGGTGGAGCGCGGGATCGTGGTGGTTTGCGCCGCCGGAAATGATGGACCGTCGTCGAAAACTGTCGTGAACGACGCGCCATGGATTTTAACGGTTGCAGCCACCACTATCGATCGGGAGTTTGAGTCTAACCTTGTGTTGGGTGACAACAAAGTGGTCCAGGGCAATGCTATAAATTTCTCTCCGCTTTCAAAGACACCGGATTATTCATTCATAAATGGCGAGTCTGCCAAGACAAGCAGTGCCACGGTTTCTGACGCAAGGCAATGCCACCCAAATGCGTTAGATGGAACAAAGGTGAAAGGGAAGATCGTGTTTTGCGATGGGCAAAACGATACTTATTCAACTACCGAAAAGGCTTTCCAAGTGTCACAAGCAGGAGGAGTAGGCATGGTTCATGTCACTGACCAAGGTGGATCTGTGACACAATTTCTTGGGAACTTTCCAGCAACCACCGTAAGCCCAAAAGATGGCGCCCCAATCTTTCAGTATCTCAATTCCACTAGCAAACCAATGGCAACAATTCTGCCAACAGTTTCAGTCATTAAGTATAAGCCTGCACCCGTGGTGGGATACTTCTCTGCAAGAGGCCCTGCAACACTTTCAAGTAATATTCTAAAGCCTGATGTTGCAGCACCGGGAGTTAACATTCTTGCGGCATGGCTTGGCAACGGTGCAGACGATGATGTCCCACAAGGACAAAAGCCCTCAGCATACAAAGTCCTTTCAGGGACTTCCATGGCATGCCCTCATGTTTCAGGCCTCGCAGCCAACGTTAAATCTCGTAACCCCACTTGGACTCCCTCTGCTATTAAGTCAGCCATAATGACTTCAGCAATTCAGAACAACAATATGAAGGCTTTATTGACAATGGATTCAGGGTCAGTAGCCACACCTTATGACTATGGAGCAGGGGAAATTACGACATCTGAACCGTTGCAACCAGGGCTAGTTTACGAAACCACCACCATTGACTACTTGAACTTCTTGTGTTACATTGGGCTTAACGTGACCACCATTAAAATCATCTCCAAAACTGTCCCTGAAAGCTTCAATTGCCCAAAGGATTTGAGCCCTTATCAAATTTCCAACATCAATTACCCTTCCATAGTAGTCTCCAACCTCAAAGGTGGAGGAGCAGTGAATGTGAGTAGAACAGTGACAAATGTTGGTGAAGACGATGAAACAACCTACTCCTCTGTTGTGGATGCTCCCAGTGGGGTAAATGTTAAGTTAATTCCAGAAAAACTTGAATTCACGGAAAGTAGTAAAACACTAAGCTACCAAGTTAGCTTCAGCTTGAGTTCAAGTTCGAAGTCGTTGAATGGAGATCAGTTTGGATCCATTACTTGGAGTGATGGCAAATATAGTGTTCAAAGTCCATTTGTATTGACTAATTAA 2319 0.4718 MKENNNYLPSLPLLFCCCVLLCLAESADNDNNNNNNEVYIVYMGAADSTNASLRNDHARVLNLVLKRNEKALVQNYKHGFSGFAAHLSKEEAESIAQKPGVVSVFPDPILKLHTTRSWEFLKYQTQVKIDSLPTAANSQSSDTIIGILDTGIWPEAESFVDTGMDPVPSRWKGTCMKSTDFNSSNCNRKIIGARYYADPNGGNDGDNTARDSNGHGTHVSSTAAGVNVANVSFYGLAEGTAVGGSPQSRLAMYRVCTNFGCRGSAILAGFDDAINDGVDVLSLSLGSPSVLRPDLTSDPIAIGSFHAVERGIVVVCAAGNDGPSSKTVVNDAPWILTVAATTIDREFESNLVLGDNKVVQGNAINFSPLSKTPDYSFINGESAKTSSATVSDARQCHPNALDGTKVKGKIVFCDGQNDTYSTTEKAFQVSQAGGVGMVHVTDQGGSVTQFLGNFPATTVSPKDGAPIFQYLNSTSKPMATILPTVSVIKYKPAPVVGYFSARGPATLSSNILKPDVAAPGVNILAAWLGNGADDDVPQGQKPSAYKVLSGTSMACPHVSGLAANVKSRNPTWTPSAIKSAIMTSAIQNNNMKALLTMDSGSVATPYDYGAGEITTSEPLQPGLVYETTTIDYLNFLCYIGLNVTTIKIISKTVPESFNCPKDLSPYQISNINYPSIVVSNLKGGGAVNVSRTVTNVGEDDETTYSSVVDAPSGVNVKLIPEKLEFTESSKTLSYQVSFSLSSSSKSLNGDQFGSITWSDGKYSVQSPFVLTN* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2107 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 113 IPR037045 -
Amo17g2107 772 Gene3D - 344 488 - -
Amo17g2107 772 SUPERFAMILY Subtilisin-like 130 614 IPR036852 GO:0004252|GO:0006508
Amo17g2107 772 Pfam Peptidase inhibitor I9 38 113 IPR010259 -
Amo17g2107 772 CDD PA_subtilisin_like 350 481 - -
Amo17g2107 772 Pfam PA domain 396 466 IPR003137 -
Amo17g2107 772 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Amo17g2107 772 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Amo17g2107 772 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Amo17g2107 772 Gene3D - 636 772 - -
Amo17g2107 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Amo17g2107 772 Pfam Subtilase family 141 593 IPR000209 GO:0006508|GO:0008236
Amo17g2107 772 MobiDBLite consensus disorder prediction 205 220 - -
Amo17g2107 772 CDD Peptidases_S8_3 110 586 IPR034197 -
Amo17g2107 772 Pfam Fibronectin type-III domain 670 769 IPR041469 -
Amo17g2107 772 ProSitePatterns Serine proteases, subtilase family, histidine active site. 215 225 IPR022398 -
Amo17g2107 772 Gene3D Peptidase S8/S53 domain 142 632 IPR036852 GO:0004252|GO:0006508
Amo17g2107 772 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 770 IPR045051 -
Amo17g2107 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 27 770 - -
Amo17g2107 772 MobiDBLite consensus disorder prediction 201 220 - -
Amo17g2107 772 ProSiteProfiles Serine proteases, subtilase domain profile. 117 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2107 Amo-Chr17 108978939 108986735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2107 39 772 Subtilisin-like Serine Gene Family AT1G20150 52.603 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2107 K25898 - gmx:100820194 1074.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2107 17 108978939 108986735 Amo17g2107 17 108978939 108986735 ECH
Amo08g0215 08 3580475 3588591 Amo17g2107 17 108978939 108986735 hybridization