Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2102 ATGGAAATTGAAGCGAAAGAATACTTTGGTGACCATGAAAGCAAGGATGATGGGCGTAAAGATGGGTTCGAATCGGATGAAGGAGGGGGGCCAGATGATGTCCTTCGAATGGAATTTAACACTCCAGATGAAGCCAAGTCCTTTTATAATAAATATAGCCGATTAAAGGGATTTGCTACGAGACAAGGGAGGAAGTTAACAAATAGTGCAGGGGATATTGTACGATACACATTTGTGTGCACTAGGCAAGGGTATCGGGAGAAGAAATGGCTAGAGATGGCTAATCAAAAAAGGGAGCACAAGATTGTGACTCGTTGTGGTTGCCTTGCCGAGATGAGGATAAAGAAAAGATGGGAGTGGCAAATGGTACATGTCTCGGTTTGTGGATGA 390 0.4359 MEIEAKEYFGDHESKDDGRKDGFESDEGGGPDDVLRMEFNTPDEAKSFYNKYSRLKGFATRQGRKLTNSAGDIVRYTFVCTRQGYREKKWLEMANQKREHKIVTRCGCLAEMRIKKRWEWQMVHVSVCG* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2102 129 MobiDBLite consensus disorder prediction 1 35 - -
Amo17g2102 129 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 31 116 - -
Amo17g2102 129 Pfam FAR1 DNA-binding domain 47 118 IPR004330 -
Amo17g2102 129 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 31 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2102 Amo-Chr17 108829735 108830124 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g2102 FAR1 1.9e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2102 - - aip:107607512 261.151