Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2086 GGTTTTCGATTTCAAGTTTTCAACCCAATGGTGACGGAGTCGAAATCCGACACCGTGGTGTACCTCCATGGAGACCTCGATCTTCGGATCATTGAGGCTCGTTACCTCCCCAACATGGACATGCTCTCGGAGCGCTTCCGCAGATTCTTCTCTGCTCTAAACACATGCACCGCCTCCATCACCGGCAGGAAGAAGACCGAGAAGAGACACCGCCACGGAAAGATCATCACCAGCGACCCTTACGTCACCGTCTGCATCGCCGGCGCCACCGTGGCTCGAACCCGCGTCATTGCTAACTCTCAGAACCCTACCTGGAACGAGCATTTCAAGATCCCTCTGGCTCACCAGGCCACGGAGCTGGAATTTTACATCAAAGATAACGACATGTTCGGCGCAGACTTGATCGGAGTCGCATTCGTCTCCGCGGATAAGATCTTATCCGGCGAAACCGTCAGCAGCTGGTTCCCGATTATCGGCACCTCCGGTAGGCCTCCGAAACCTAATTGCGCGGTTAAGCTCGAGATGAAATTCACGAAATGCGAGGATTCTCCTCTGTACAGATCCAACATTGCACCAGAACCTAATCGGTTCGCCGTTCCGGATACGTATTTTCCGATTCGGCATGGAGGTTCGGTGACTCTGTACCAGGACGCGCACGTGCCGGATTCGATGCTGCCAGAGATTGGATTGGATGATGGAGTTGAGTTTCAGCAAGGTAAGTGCTGGGAAGATATCTGCCATTCGATCTTGGAGGCCCATCATTTGGTATACATTGTGGGTTGGTCCATTTACGATAAGGTGAAGCTCGTTAGAGAGCCCACTAGGCCTTTACCCAGCGGTGGAGATTTGAGCCTCGGTGAGTTGCTCAAGTACAAGTCTCAAGAAGGCGTTAGGGTCTTAATGTTGGTCTGGGATGACAAGACTTCGCACAATAAATTCTTCATTCACACGGATGGAGTAATGCAAACTCATGACGAAGAAACTCGAAGGTTCTTCAAGCATTCTTCAGTAACATGTGTGCTGTCACCTCGATATGCCAGCAGTAAGCTTAGCATTTTCAGGCAGCAGGTTGTTGGAACACTCTTCACGCATCATCAAAAATGTGTAATAGTTGATACTCAAGGACAGGGAAACCATAGAAAGATAACCGCATTTATAGGTGGTCTAGATCTTTGTGATGGGCGTTATGATACACCTGAGCACAGGATTGTCCGAGATCTTGACACTGTTTTTCAGAATGATCATCATAATCCTACATTTTCTGCAGGAGTCAAGTGTCCAAGGCAAGCATGGCATGACTTACATTGCAAAATTGAGGGTCCTGCTGTGTATGATATACTCACTAATTTTGAGCAGCGCTGGAGAAAAGCCGCTAGATGGTCTGAGTTGGGTAAAAAAATCAAGAGAGTATCGTATTGGCAAGATGATTCTCTCATCAAGTTGGAACGCATTTCTTGGATTCTCAGTCCTTCTGAGTCAGTTCCAAATGATCATCCTGACTTGTGGATTTCCAAGGAAGATGACCCCCAAAATTGGAACGTTCAGGTTTTTCGATCTATTGACTCTGGCTCAGTGAAAGGGTTTCCTAAGGATGTACTCGAAGCTGAGAATCAGAACCTCGTTTGTGCAAAAAATTTGGTGATTGACAAGAGTATTCAGACAGCATACATACATGCGATAAGATCTGCACAACATTTTATTTATATCGAGAATCAATATTTCATCGGATCATCCTTTGCATGGCCATCCTACAAAGAAGCAGGTGCTGATAACCTAATTCCTATGGAGTTAGCACTGAAGATAGTTAGTAAGATTAGATCCAAGGAGAGATTTACAGTTTATATTGTCATCCCAATGTTTCCTGAAGGTGTCCCTTCTTCTGTGGCAATGCAAGAGATTCTGTTTTGGCAGGGACAAACTATGCAGATGATGTATGACATCATAGCTCGGGAGTTAAAAGCTGCAAACCTTGAAGACAGCCATCCACAAGACTACCTGAACTTTTACTGTCTTGGAAACAGGGAGAATTTAACTGAAGTTCCAAACTCAAATGCTTCTGTGATTTCGAATACTAGCGAAACGGTTGCATCTTCCAAGTACAACCGTTTTATGGTTTATGTACATGCGAAAGGAATGGTTGTGGATGATGAATATGTTATACTCGGATCGGCCAACATTAATCAACGATCAATGGCTGGATCGAGAGATACAGAGATCGCAATGGGTGCATATCAACCCCATCATACATGGGCTAAGAAACAGAGGCATCCACATGGTCATGTATATGGGTACAGAATGTCTTTATGGGCGGAACACATGGGTTACATCGATGAATGCTTCAAGGAGCCTGAAACTTTGGAATGCGTCCAAATTGTGAACAAGATTGCTGAAGAGAACTGGAATAAGTATACAGCTGATTCTTTTGCACCAATGCAAGGGCACCTAATGAAATATCCTGTAAGAGTAGATGCAAATGGCAAGGTCAGCTGCTTACCCGGTTTTGAGACTTTCCCAGATGTTGGTGGCAAAGTACTTGGCTCACGCTCAACCCTTCCCTCTGCTCTAACAACATAG 2574 0.4561 GFRFQVFNPMVTESKSDTVVYLHGDLDLRIIEARYLPNMDMLSERFRRFFSALNTCTASITGRKKTEKRHRHGKIITSDPYVTVCIAGATVARTRVIANSQNPTWNEHFKIPLAHQATELEFYIKDNDMFGADLIGVAFVSADKILSGETVSSWFPIIGTSGRPPKPNCAVKLEMKFTKCEDSPLYRSNIAPEPNRFAVPDTYFPIRHGGSVTLYQDAHVPDSMLPEIGLDDGVEFQQGKCWEDICHSILEAHHLVYIVGWSIYDKVKLVREPTRPLPSGGDLSLGELLKYKSQEGVRVLMLVWDDKTSHNKFFIHTDGVMQTHDEETRRFFKHSSVTCVLSPRYASSKLSIFRQQVVGTLFTHHQKCVIVDTQGQGNHRKITAFIGGLDLCDGRYDTPEHRIVRDLDTVFQNDHHNPTFSAGVKCPRQAWHDLHCKIEGPAVYDILTNFEQRWRKAARWSELGKKIKRVSYWQDDSLIKLERISWILSPSESVPNDHPDLWISKEDDPQNWNVQVFRSIDSGSVKGFPKDVLEAENQNLVCAKNLVIDKSIQTAYIHAIRSAQHFIYIENQYFIGSSFAWPSYKEAGADNLIPMELALKIVSKIRSKERFTVYIVIPMFPEGVPSSVAMQEILFWQGQTMQMMYDIIARELKAANLEDSHPQDYLNFYCLGNRENLTEVPNSNASVISNTSETVASSKYNRFMVYVHAKGMVVDDEYVILGSANINQRSMAGSRDTEIAMGAYQPHHTWAKKQRHPHGHVYGYRMSLWAEHMGYIDECFKEPETLECVQIVNKIAEENWNKYTADSFAPMQGHLMKYPVRVDANGKVSCLPGFETFPDVGGKVLGSRSTLPSALTT* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2086 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 22 178 IPR035892 -
Amo17g2086 857 PANTHER PHOSPHOLIPASE D 15 856 IPR015679 -
Amo17g2086 857 Pfam Phospholipase D Active site motif 361 395 IPR001736 GO:0003824
Amo17g2086 857 SMART C2_3c 25 154 IPR000008 -
Amo17g2086 857 Pfam PLD-like domain 557 740 IPR025202 -
Amo17g2086 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 703 730 IPR001736 GO:0003824
Amo17g2086 857 ProSiteProfiles C2 domain profile. 5 155 IPR000008 -
Amo17g2086 857 Pfam C2 domain 24 157 IPR000008 -
Amo17g2086 857 Gene3D Endonuclease Chain A 234 478 - -
Amo17g2086 857 PANTHER PHOSPHOLIPASE D 15 856 - -
Amo17g2086 857 SMART pld_4 360 395 IPR001736 GO:0003824
Amo17g2086 857 SMART pld_4 703 730 IPR001736 GO:0003824
Amo17g2086 857 PIRSF PLD_plant 10 857 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Amo17g2086 857 Pfam Phospholipase D C terminal 777 847 IPR024632 -
Amo17g2086 857 SUPERFAMILY Phospholipase D/nuclease 241 462 - -
Amo17g2086 857 Gene3D Endonuclease Chain A 502 755 - -
Amo17g2086 857 SUPERFAMILY Phospholipase D/nuclease 549 788 - -
Amo17g2086 857 Gene3D C2 domain 23 186 IPR035892 -
Amo17g2086 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 360 395 IPR001736 GO:0003824
Amo17g2086 857 CDD C2_plant_PLD 19 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2086 Amo-Chr17 107461677 107465981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2086 11 688 Phospholipase D Gene Family (Wang group) AT4G35790 64.799 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2086 K01115 - gmx:100795859 1452.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2086 17 107461677 107465981 Amo17g2086 17 107461677 107465981 ECH