Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2079 ATGCAGGTTCGTGCTTCTTCTGCTGTACGCAGTCCTCAATATTTTGATACTTCAGCCACAATGATGAGCTTCCATCCACCCCCAGCCTTTGCTTCATCAGCTAATCTTGAACTTGATCTATGCAAAAGTCAGTTACAAGCTGAAGATAAGAGTAACAATTTCAATTTTTACGCACACTATGCCCGTAATTCATGCAGGCCAGTGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTCCTCAGTCAGTTAACTTCTTTAATCTCTGAGACTGGGCTTGACATTCAAGAAGCACATGCTTTTTCGACGTTGGATGGATACTCTCTGGATGTTTTTGTTGTTGGTGGTTGGGCAGTTGAGGAGACAGAGAAATTAAAACATGTACTAGCAAAGAAAATGCAAAAACTCGAGGTATAA 420 0.4048 MQVRASSAVRSPQYFDTSATMMSFHPPPAFASSANLELDLCKSQLQAEDKSNNFNFYAHYARNSCRPVHEITISTNDKPKLLSQLTSLISETGLDIQEAHAFSTLDGYSLDVFVVGGWAVEETEKLKHVLAKKMQKLEV* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2079 139 SUPERFAMILY ACT-like 66 138 IPR045865 -
Amo17g2079 139 Gene3D - 67 139 - -
Amo17g2079 139 Coils Coil 120 139 - -
Amo17g2079 139 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 138 - -
Amo17g2079 139 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 11 138 - -
Amo17g2079 139 ProSiteProfiles ACT domain profile. 70 139 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2079 Amo-Chr17 106327444 106328910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2079 17 139 MAP Kinase Kinase Kinase AT4G38470 57.258 1.76e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2079 - - gmx:100818047 185.652