Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2060 ATGGCAATGGGCTGCAACGGCTCAAAAGTGGAGAGGCTTCCGGCGGTTTCGTTGTGCCGGGACCGTTGCAACTTGCTCGACGACGCACTCTTTCAAAATGCTCAAGATATAGACGATAGCCAAACAGAATTATTCATCACTGTAAGCCGTCACGATGAGTATCTCAACTACCATACTTATGATAACGTGGCTTTCATGCATTACGTACTCCAATCTCCACCGCCTCTGCCTTCCCCTCCCAGCACCTCACGCTGGGAATTCTTCAACTTTTTCGAACCCTACGACGACACTTACTGTGCCACTGCTGACGTGGCAACAAAAGAAGAGAAGGAGGACACTGACAGGGGAAAGGTCGCGACTCGCCACGAGTCCTTGAATGAAGCTAAGAAGGTGAATGTGGAACAGAATGAAGGAGTGGAAAATAAGGAAGCTGGTTTGACAGAAGAATGCAGCGGTTACTCGGAGAGAGTGAAAGAGATTCAGATTCTATTCGAGAGAGCATCCGATTCAGGCAATCCACTTTTAGAAATGCTTGACATAAGTGTAGCAGTTTCTTCGTGCAAGATAAAGAATCTGTTTACTCACTCGTTAAATTGCACGGAGAAGTCATCATTGATTGGGAGGACAATGGCATCTGAGCATCAAGCTCAAGCAACCGATAAAGACTGGGGCCATGGATATGGGAATCTCTGCTCCACATTGAAGAAACTCTCTGTGTGGGAGAGGAAGTTATATCATGAAGTCAAGACCGAGGAGAAGCTGCGCATACTTCATCAGAAGAACTGTAGGGAGTTAAGAAGAATGAATAAAAAGGGTGCGGATGCACAGAAAGTCGATTCTGTGAAAACTTTGATTGGGATGTTAACCACAAAAATGAATATTTCTATCCGAGTTGTTGATAGGATATCTAATACCATTAGTAAGTTGAGGGAAGAGGAGTTATGGCCGCAGATCAACAACTTCATTCACATGTTTCTTGAGATGTGGAAACATATGGCAGAGTGTCATCGACGCCAATATCAGGAAATTGTGAAATCCAAAACTCTAGATGCATCTACATTATTGGAGAAGCAATTCGACCAGGCTCAAATTGACGCAGTAATAAAGCTCAAGTGTGAATTACAGAACTGGAATATAAGCTTCTCAGATTGGATTCAAGCCCAAAAGTGTTATGTGAAAGCCTTGAATAGTTGGCTAGTAAGGTTTCTATTATATGGACCTGAAGAATTACCTGATGATGATACAACTACCTTCTCTCCGAGCAAGATCGACGCGCCACCGGTGTTTGTGATCTGTAACAAATGGTCACAAGCAATGGATAATCTCTCGGAGAAGAATGTAACTGAAGCCGTTAATGGATTCATAGTAAGATTGAATGAGCTCTTGGAGAAGCATATTATAGACGTTCGACAAAGATTGATATTGGACAAGGAACTTGAGAGAAAAGTGAAGATTATGGAGAAGCAAGAGCAAAAGATGCACAAGATAGTGCAGGCTCGCCAGAGAAAGATGGCTGCAATTGGAAGAGAAGAAGAGAATGAGACCCTGTTCAGAGTGGATCATGGTGATCTTGTTGATATCAAGGATCATAGCCTGCTATCAAGTATGAAACATATCTTTGCTTCTATGGAAAGGTTCACTGCTACCAACGCTGGCTTGTATCAAGATCTTTGCCAACAAATTAACCATGTTTTGGGACAATCCAATGAAATTCACTAG 1719 0.4287 MAMGCNGSKVERLPAVSLCRDRCNLLDDALFQNAQDIDDSQTELFITVSRHDEYLNYHTYDNVAFMHYVLQSPPPLPSPPSTSRWEFFNFFEPYDDTYCATADVATKEEKEDTDRGKVATRHESLNEAKKVNVEQNEGVENKEAGLTEECSGYSERVKEIQILFERASDSGNPLLEMLDISVAVSSCKIKNLFTHSLNCTEKSSLIGRTMASEHQAQATDKDWGHGYGNLCSTLKKLSVWERKLYHEVKTEEKLRILHQKNCRELRRMNKKGADAQKVDSVKTLIGMLTTKMNISIRVVDRISNTISKLREEELWPQINNFIHMFLEMWKHMAECHRRQYQEIVKSKTLDASTLLEKQFDQAQIDAVIKLKCELQNWNISFSDWIQAQKCYVKALNSWLVRFLLYGPEELPDDDTTTFSPSKIDAPPVFVICNKWSQAMDNLSEKNVTEAVNGFIVRLNELLEKHIIDVRQRLILDKELERKVKIMEKQEQKMHKIVQARQRKMAAIGREEENETLFRVDHGDLVDIKDHSLLSSMKHIFASMERFTATNAGLYQDLCQQINHVLGQSNEIH* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2060 572 Pfam Protein of unknown function (DUF630) 3 30 IPR006868 -
Amo17g2060 572 PANTHER F5M15.15 64 564 - -
Amo17g2060 572 Pfam Protein of unknown function (DUF632) 155 457 IPR006867 -
Amo17g2060 572 PANTHER UNCHARACTERIZED 64 564 - -
Amo17g2060 572 PANTHER UNCHARACTERIZED 3 33 - -
Amo17g2060 572 PANTHER F5M15.15 3 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2060 Amo-Chr17 104722515 104725601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2060 157 464 Acyl Lipid Metabolism Gene Families AT2G27090 25.862 2.00e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2060 - - adu:107460238 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g2060 17 104722515 104725601 Amo17g2060 17 104722515 104725601 ECH
Amo17g2060 17 104722515 104725601 Amo07g0157 07 1511570 1514198 hybridization