Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2059 ATGCGTGTTTGGGTGTGCGTGTGTCTGAAGAAGCTGCTTCAAACACACTCACACCAACGGAAACATAACGGAGTTTACGTTATCTGCTTCCAACTAATGGGTTGTTGCCAATCTAATTCGAGCCGTCATAACTACCCTCATCCGCTTACGGTTGCTTCCTCCCCTAACGGCGCCAACAACAATAACAACAATAACACCGTTGTTACTGGTGCCTCCGCCGCTGCCTCTGCCGCCCTAGACGTCCCTCCTTTCTCTGAGTTCTCCCTCTCCGACCTCAAATCGGCCACCAACGGCTTTAGCTCCGATCACATCGTCTCCGAGAGCGGCGACAAAGCCCCCAATGTGGTCTATAAGGGTCGCCTCAACAATCATAACCGACGTTTGATTGCCGTCAAGAGATTCTCCAAATCGGCATGGCCCGACCCCAAGCAGTTCGCTGATGAGGCTTGGAGTGTTGGGAAATTGAGGCACCCTAGGCTTGCGAATTTGATTGGGTATTGCTGTGATGGGGATGAGAGGCTTCTCGTTGCAGAATACATGCMCAACGACACTCTCGCCAAACATCTTTTTCATTGGGAAAATCAGACAATTGAGTGGAGCATGCGATTAAGAGTTGCCCTGTCCATCACACAAGCATTGGATTATTGCAGTAAYAAAGGTCACCCATTGTACCATGAYCTGAATGCCTACAGAGTGCTATTTGATGAGAATGGTGATCCGAGGATTTCATGTTTTGGGCTGATTAAGAACAGTAGGGACGGCAAAAGTTATAGCACGAATCTTGCTTATACCCCTCCAGAGTACCTGAGAAACGGGAGGGTGACTCCAGAAAGTGTAATCTTCAGTTTTGGAACTGTGTTATTGGATCTACTAAGCGGCAAGCATATCCCTCCAAGTCATGCTCTTGACATGATAAGGGGTAAAAATATTCTACGTCTAATGGATTCACACTTGGAGGGAAACTTTTCCACCGATGAGGCAACTGTGGTTTTCGACCTTGCCTCTAAGTGCTTGCAATATGAACCTCGAGAACGGCCCAAGATCAATGACCTTGTTACGACTCTGTCCAGACTGCAGAATAAACCCGATGTTCCATCATATGTCATGCTTGGCATTGCAAAGCACGAGGAAGCACCAGCACCGCCAACTCCCCAGCATCCTCTATCTCCAATGGGTGATGCTTGTTCTCGCATGGACCTTACAGCTATTCATCAGATATTGTTGATGACACACTATAAAGATGATGAAGGAACTAAYGAGTTATCTTTCCAAGAATGGACTCAGCAAATGAGGGATATGTTGGAGGCAAGAAAGCGGGGCGACCTGGCATTCCGTGATAAGGATTTCAAAACTTCAATTGAGTGTTACTCCCAGTTCATTGATGTGGGAACCATGGTTTCCCCAACCGTTTATGCGCGGAGAAGTCTTTGCTACCTGTTTTGCGATCAACCGGATGCTGCGCTGCGAGATGCAATGCAAGCTCAGTTGGTCTATCCGGACTGGGCGACRGCATTTTACATGCAGGCTGTTGCWCTGTCCAAATTAAACATGGATAAGGATGCAGCTGACATGCTGAACGAGGCCGCTTCCTTAGAAGAGAAACGGCAAAGAGGAGGGAAATGA 1623 0.4769 MRVWVCVCLKKLLQTHSHQRKHNGVYVICFQLMGCCQSNSSRHNYPHPLTVASSPNGANNNNNNNTVVTGASAAASAALDVPPFSEFSLSDLKSATNGFSSDHIVSESGDKAPNVVYKGRLNNHNRRLIAVKRFSKSAWPDPKQFADEAWSVGKLRHPRLANLIGYCCDGDERLLVAEYMXNDTLAKHLFHWENQTIEWSMRLRVALSITQALDYCSNKGHPLYHDLNAYRVLFDENGDPRISCFGLIKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIRGKNILRLMDSHLEGNFSTDEATVVFDLASKCLQYEPRERPKINDLVTTLSRLQNKPDVPSYVMLGIAKHEEAPAPPTPQHPLSPMGDACSRMDLTAIHQILLMTHYKDDEGTNELSFQEWTQQMRDMLEARKRGDLAFRDKDFKTSIECYSQFIDVGTMVSPTVYARRSLCYLFCDQPDAALRDAMQAQLVYPDWATAFYMQAVALSKLNMDKDAADMLNEAASLEEKRQRGGK* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2059 540 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 33 539 IPR045845 GO:0004672|GO:0009742
Amo17g2059 540 Coils Coil 514 534 - -
Amo17g2059 540 ProSiteProfiles Protein kinase domain profile. 102 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g2059 540 Gene3D Transferase(Phosphotransferase) domain 1 181 372 - -
Amo17g2059 540 Gene3D Phosphorylase Kinase; domain 1 75 179 - -
Amo17g2059 540 SUPERFAMILY TPR-like 436 533 IPR011990 GO:0005515
Amo17g2059 540 Pfam Protein tyrosine and serine/threonine kinase 115 355 IPR001245 GO:0004672|GO:0006468
Amo17g2059 540 SUPERFAMILY Protein kinase-like (PK-like) 82 365 IPR011009 -
Amo17g2059 540 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 33 539 - -
Amo17g2059 540 Gene3D Tetratricopeptide repeat domain 431 538 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2059 Amo-Chr17 104706454 104711094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2059 43 367 Glycoside Hydrolase AT3G07070 32.584 7.42e-45 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Amo17g2059 PK_Tyr_Ser-Thr 1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2059 K14500 - qsu:111999979 840.491