Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2056 ATGATGATTGTGAGCACCACACCTAAGACTGAGAGAAAGAAGTCAAGGAAGAACAAGGCAACAGTTAGTGAGAATGCTCCCTTATTGCCTAAGACTCAAGAGAGTGATGCTGGTTTGATGATTTCAATGGAGCTTCATTCTCGGGAGCAGTTTTTCAACTTGTCAACAACAATCATTGGTGCTGGGATCATGGCCTTGCTTGCAACCTTAAGGGAGTTGGGGATGTTGCCTGGCCTCGCCTTCATAGTCTTCATGGCTTTGTTGATTGAGAAGTCAATTGAGTTCTTGATCAGGTTCACCAGGGCAGGAAAAGTTGTTTCCTATGGTGGCCTCATGGGGGATTCATTTGGGAAATATGGGAAAGCACTTGTGCAGCTATGTGTCATAATCAATAACATTGGTGTGCTCATTGTTTACATGATCATAATTGGTGATGTGCTTTCTGGAACATCTGCAAGTGGAGAACATCATTCTGGTATCCTAGAAGGATGGTTTAGTGCACACTGGACGATTTGGTTTGCCTGGAATCTCATTGCAGCTGGTTATGTCGAACAATCTGTATATGGGGAAGATAGGGCTGATATTACTGCGAATTCTCTTCATTCGGGAACCATTGCCACCAACCTTTTTCGTCATATGGGTGTGGCCAATGGTATAGTTAATGCAATTGGGAGACTTGTGCTTAAAATTGTCCAGCAGGGAGTTAGTGGCAAATACTTCTCTGATAGCAATATGTCCAAAATCATCTCCCACGGAACTGATGCTAATTTGGCTAAGAAACTCTGGGATTTCAGTATGAATTTGATCAAGTAG 813 0.4293 MMIVSTTPKTERKKSRKNKATVSENAPLLPKTQESDAGLMISMELHSREQFFNLSTTIIGAGIMALLATLRELGMLPGLAFIVFMALLIEKSIEFLIRFTRAGKVVSYGGLMGDSFGKYGKALVQLCVIINNIGVLIVYMIIIGDVLSGTSASGEHHSGILEGWFSAHWTIWFAWNLIAAGYVEQSVYGEDRADITANSLHSGTIATNLFRHMGVANGIVNAIGRLVLKIVQQGVSGKYFSDSNMSKIISHGTDANLAKKLWDFSMNLIK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2056 270 MobiDBLite consensus disorder prediction 1 27 - -
Amo17g2056 270 Gene3D - 174 270 - -
Amo17g2056 270 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 7 178 - -
Amo17g2056 270 PANTHER AMINO ACID TRANSPORTER 7 178 - -
Amo17g2056 270 Pfam Transmembrane amino acid transporter protein 49 154 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2056 Amo-Chr17 104454998 104457609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2056 15 176 Amino Acid or Auxin Permease AAAP Family AT3G30390 52.976 2.02e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2056 K14207 - aip:107607490 330.487