Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2016 ATGATTTTCAAGACATTAGAAGAAGCCGAAAAATTTTACAAAAATTATTCTAAACTTGCCGACAAGATTAAGAATCAACTTATTGTATGCAGCAGAGACGGGAGGTGGAAATCTAAGATATCTCCTACTCTGAAGACAAATCCCTCAGCCGGCATAAACTGTCCGGCCAGGATATATATACACATATTGAAGGACGCAGGTCTTTGGACAATTTCTAAAGTTGTTTTGAATCACTCACACCCCTGCTGCCCAGACCGGGCAGAGATGCTCAAACAACACAGAGAGCTAAGCATGTTCGTGCGTCGCACCATTGAAACCAACAAGGAAGCCGGAATTAGACCTAGCAAAACTTACCAATCATTCGTAGCAACAACCGGCAATCACCGTGAACTAAAGCTGTACGAGGATCGGCATATATGGATTCCAGTTTACCTAGATCACCACTTCTGGGTCCGGATGACAAGCACACAAAGGAGCAAGAGCATGCACGCATTTTTCAATAAGTTCATCACATGCAACATCTCCTTGAGAAAATTTGTGAAGCAATACGACAATTGCCTAGCAAGCAGAGAGCAAAGAGAGAGAGAATTCGACGCTTCAGATTTTCACACCGTGATACCGTGTGCAACAAAATCAGCAACAGAGGCCCAGTTTCAGCACGTGTATACCCACGAGAAGTTCAGGGAAGCTCAAGCACAATTTAGAGGTAAAGTAAAATGCATCACAAGATCAATGCATTCCACCTTAGGTTTATAA 756 0.4286 MIFKTLEEAEKFYKNYSKLADKIKNQLIVCSRDGRWKSKISPTLKTNPSAGINCPARIYIHILKDAGLWTISKVVLNHSHPCCPDRAEMLKQHRELSMFVRRTIETNKEAGIRPSKTYQSFVATTGNHRELKLYEDRHIWIPVYLDHHFWVRMTSTQRSKSMHAFFNKFITCNISLRKFVKQYDNCLASREQREREFDASDFHTVIPCATKSATEAQFQHVYTHEKFREAQAQFRGKVKCITRSMHSTLGL* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2016 251 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 115 IPR031052 GO:0006355
Amo17g2016 251 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 132 247 IPR031052 GO:0006355
Amo17g2016 251 Coils Coil 6 26 - -
Amo17g2016 251 PANTHER OS06G0517100 PROTEIN 1 115 - -
Amo17g2016 251 PANTHER OS06G0517100 PROTEIN 132 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2016 Amo-Chr17 102907897 102909538 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g2016 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2016 - - aip:107646405 235.728