Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g2013 ATGAAAGGCAAGATAAGAGTGCACTGTCGGCTAAGGCCTCTAAGTGACAAAGAGATTGCTAAAAAAGATGGAGATTCTCTTACTACTATAGATGAGTTTACCGTTGAACATCAACAGAAAGACGATAAACCAAAAAAACACATATATGATCATGTGTTTGATGGCAATGCCACTCAAGAAGATGTATTTGAGGAAACAAGGGAAAAGAAAGATACTCAGGAACATCATTTAGGGAATTAA 240 0.3625 MKGKIRVHCRLRPLSDKEIAKKDGDSLTTIDEFTVEHQQKDDKPKKHIYDHVFDGNATQEDVFEETREKKDTQEHHLGN* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g2013 79 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 1 67 - -
Amo17g2013 79 ProSiteProfiles Kinesin motor domain profile. 4 79 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g2013 79 Pfam Microtubule binding 1 67 IPR031852 GO:0008017
Amo17g2013 79 PANTHER KINESIN-RELATED 1 67 IPR027640 GO:0003777|GO:0007018
Amo17g2013 79 MobiDBLite consensus disorder prediction 56 79 - -
Amo17g2013 79 Gene3D Kinesin motor domain 1 73 IPR036961 -
Amo17g2013 79 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 67 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g2013 Amo-Chr17 102820365 102820883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g2013 1 67 Calmodulin-binding Proteins AT5G65930 62.687 2.63e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g2013 - - aip:107607071 147.517