Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1924 ATGGGCGACGGCAAGGTATCCGCAACGCTCTCTTCTCCTCTAAGCCCTCCGATTCCAAAGCCTCCCCTCTGCCTCGTCTCCCCCTCGTCACTAGGGTCGCCCTCCTCGCTGATCTCCTCTGCATCATCAGTGTCGTCTCTCTCTCTGCTCCCAACGCTAACTGCAATGGCTGACGACGAACCTGTTGATCAAAAGAGATATCTCAAAGACTCTTGCAAACCAAAGTGTGTCAAACCATTACTTGAATATCAGAAACAAACAAGAAATCCTACCATTCTTTCATTCTGTTCTTCAATTGCCTTCCTTTTTCTTCCTTCTGTGCAGAGGGTTGCCATGGCGATTTTTCCACCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCCTGGTTCTCCAGAGGCTCTTACACTAGCCAACTGGATCTGCTGCAGTTATAGGCAATCGGTGCCGGTGTTTATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTACAAGACATCACATGGTGCCTTGTATTAACTCCATCTTGTGAAGGCAGAGAAAGCTAG 567 0.485 MGDGKVSATLSSPLSPPIPKPPLCLVSPSSLGSPSSLISSASSVSSLSLLPTLTAMADDEPVDQKRYLKDSCKPKCVKPLLEYQKQTRNPTILSFCSSIAFLFLPSVQRVAMAIFPPGINPAVGSKLSPGSPEALTLANWICCSYRQSVPVFIFANQAGLDMLETTLVALQDITWCLVLTPSCEGRES* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1924 188 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 102 145 IPR044830 GO:0003700
Amo17g1924 188 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 142 174 IPR044830 GO:0003700
Amo17g1924 188 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 102 145 - -
Amo17g1924 188 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 142 174 - -
Amo17g1924 188 Pfam MEKHLA domain 141 181 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1924 Amo-Chr17 96799563 96801035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1924 104 188 Homeobox Transcription Factor Family AT5G60690 48.333 7.40e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1924 K09338 - aip:107640931 116.316