Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1920 ATGGCTTCAATTGGGGTGTCAGAGATGCTTGAAAACCCCATCAAGTTGAGTGGTGCAGCAAGGTCAGCACCATCAGCTTCTAGCCCTGCCACCTTAGAGACTATGGCTCTCTTTGGTAAGAAGAAGGCAGCACCACCTCCTCCTTCAAAGAAAGCTGTTGTTGCTATCACTCCTGCCAATGATGAACTCGCTAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCAGAGGGTCTCTTGGACCGATCCAAGATCCCACCATACTTGACTGGAGAAGTGCCCGGAGACTATGGTTATGATCCTTTTGGTCCCAGCAAGAAGCCAGAGGACTTTGCCAAGCTTTGGCATCGTACCTCGTTAAACTTCATGCAGAATGTAGTTAATGGAAACCAGAGTCCTTTCTTCCTTATTCCTTCCTCCAACTACTTGGAACTTCTCGCAAATGCCTTGGACCGTGAAAATTGGTCACTGGTTCAATTCATGTCATCTTCTTACAGTGGATATGGCACCTCCAGCTTGCAACAAGTAAAAAAGTTCACAAATCTTCCAGAAACAATTATGTATGATCTAAGGAAAGGATGTTTAAGAGGGCGAGAGGAAGGAGGAACAACAAAGGAAATATAA 624 0.4551 MASIGVSEMLENPIKLSGAARSAPSASSPATLETMALFGKKKAAPPPPSKKAVVAITPANDELAKWYGPDRRIFLPEGLLDRSKIPPYLTGEVPGDYGYDPFGPSKKPEDFAKLWHRTSLNFMQNVVNGNQSPFFLIPSSNYLELLANALDRENWSLVQFMSSSYSGYGTSSLQQVKKFTNLPETIMYDLRKGCLRGREEGGTTKEI* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1920 207 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 114 IPR001344 GO:0009765|GO:0016020
Amo17g1920 207 SUPERFAMILY Chlorophyll a-b binding protein 65 114 - -
Amo17g1920 207 Gene3D alpha/beta hydrolase 136 182 IPR029058 -
Amo17g1920 207 Pfam Protein of unknown function (DUF1749) 141 175 IPR013744 -
Amo17g1920 207 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 2 114 - -
Amo17g1920 207 Gene3D Chlorophyll a/b binding protein domain 73 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1920 Amo-Chr17 96207587 96209525 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1920 1 113 Chloroplast and Mitochondria Gene Families AT4G10340 58.772 8.09e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1920 K08916 - ahf:112736459 162.925