Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1832 ATCGTAGCGCGCCACCCAGACCGTTCATCTACCTTCGTAGTCTCTGCTCTCACCATCACTGGTCACCATCGTCGTATCTGTGCTCACTGTCGCTGCTCAACCAAGTTGTCTCTGCTCTCACCATTGCATCTCACCCTTGTTGTCTCTGTGCCGACCGTCGCCGCGCGCCTAGCATCATCGTTCTCTCTGCTCACCATCGTCGAGAAGTTTCCTAAGGAATGCTTGAGTACAATGTTGGTGGGTTTCGATTTGACCAAGAGAGAGGTAGTTCATAGTTGCAAGATTGATCCTTGTGTTCAGAGAGTTTTATCAGCAAGACAAGCTTTGAGGGCGTTGAGGGCAGTGGTGAGGCTGCAGGCTATATTTCACGGAAGGCTAGCGAGGAAGCAAGTTGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTCGAGTTCAAGCTCGCGTCCGCGCTAGGAATGAGAGGAACTCTCCAGAAGGGAAAGCAGTGCAGACACTATTAGATCAGTACCGCAACCAAGCTGATCCTATCAAGGAGGCTAAGGTATTTGAAGATATTTCTGGTGCTTTTTCCAATTTTAATCTGTACCCCGTACTGGGTATTTTAATTTGA 609 0.4893 IVARHPDRSSTFVVSALTITGHHRRICAHCRCSTKLSLLSPLHLTLVVSVPTVAARLASSFSLLTIVEKFPKECLSTMLVGFDLTKREVVHSCKIDPCVQRVLSARQALRALRAVVRLQAIFHGRLARKQVAVTLRCMQALVRVQARVRARNERNSPEGKAVQTLLDQYRNQADPIKEAKVFEDISGAFSNFNLYPVLGILI* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1832 202 PANTHER IQ-DOMAIN 5-RELATED 98 170 - -
Amo17g1832 202 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 98 170 - -
Amo17g1832 202 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1832 Amo-Chr17 86487597 86489998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1832 45 190 IQD Protein Family AT1G72670 42.177 3.91e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1832 - - aip:107640854 226.098