Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1825 ATGGGCGACGGCAAGGTATCCGCGACGCTCTCTTCTCCTCCAAGCCCTCCGATTCCAAAGCTTCAGGACTACTCTCTCACTCTCAACTCGATCTTACGCTGTCACTCTCAACTCCTATCTCTCAACCCTGGAAGAGCTCAGATCCCCGCCGTCACCAGCACCGTCCTCGCTGCGCCATTAGCCTCCCCTCTGCCTCGTCTCCCCCTCGTCACTAGGGTTGCCCTCCTCGCCGATCTCCTCTGCATCGTCAGTTTCAGGGTTGCCATGGCGATTTCTCCATCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCCTGGTTCTCCAGAGGCTCTTACACTAGCCAACTGGATCTGCTGCAATTATAGGCAAGTCTGCATCTGTTGTATTGTTTATTATTTGGGGGCAGAGTTGCTGAGATTTGATTCTCTCATTGGTGAGTCAGTGCTTAAACATTTGTGGCATCATCAGGATGCCATTTTGTGTTATTCTTTGAAGTCGGTGCCGGTGTTTATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTACAAGACATCACATGGTGCCTTGTATTAACTCCATCTTGTGAAGGCAGAGAAAGCTAG 624 0.5048 MGDGKVSATLSSPPSPPIPKLQDYSLTLNSILRCHSQLLSLNPGRAQIPAVTSTVLAAPLASPLPRLPLVTRVALLADLLCIVSFRVAMAISPSGINPAVGSKLSPGSPEALTLANWICCNYRQVCICCIVYYLGAELLRFDSLIGESVLKHLWHHQDAILCYSLKSVPVFIFANQAGLDMLETTLVALQDITWCLVLTPSCEGRES* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1825 207 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 86 193 - -
Amo17g1825 207 Pfam MEKHLA domain 113 200 IPR013978 -
Amo17g1825 207 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 86 193 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1825 Amo-Chr17 85088773 85090243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1825 86 207 Homeobox Transcription Factor Family AT5G60690 65.041 5.98e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1825 K09338 - adu:107466361 188.348