Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1821 ATGGCTACATGGAAGGTTGCCCCTACTCTGGCAGCTGGTTGTGCTGCGATATTAAAGGCTTCCGAATTGGCATCTGTGACATGTTTGGAGTTGGCTGACATATGCAAAGAAGTGGGCCTTCCTCCGGGTTCTAAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCATTTTGGGAAGAAAATTATGGAGCTTGAGCAGGAAAAAAGAAAACTACAGAAATCTCAAGATGTTCATGGCCAAAAATTGAAAGCACTAGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAACCAGGTGCAGCTACTAAAGCAAAAGGAGAAGAGCGAAGAAACTATAAAAAAATTGCAAGCTGAAATACAGTACATCAAGGCTCAAAAGGCACTTGTCCAATTGCAGTATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGAGAAAAGGAGTTACTTCAGTGGATCTTTCAGGCCTTATGCTTAATTGTGCACAATATACAATTCAATCAGTTCTCGGATTGCCAGATAGGCGTGCAAGTTGGTGACAACAATTGA 573 0.4136 MATWKVAPTLAAGCAAILKASELASVTCLELADICKEVGLPPGSKMKRIGIDTEALKEHFGKKIMELEQEKRKLQKSQDVHGQKLKALEAQILDLKKKQENQVQLLKQKEKSEETIKKLQAEIQYIKAQKALVQLQYKMKQEAEQFRQWKASREKELLQWIFQALCLIVHNIQFNQFSDCQIGVQVGDNN* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1821 190 Coils Coil 57 77 - -
Amo17g1821 190 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 74 159 - -
Amo17g1821 190 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 43 79 - -
Amo17g1821 190 PANTHER KINESIN-LIKE PROTEIN KIN-4B 74 159 - -
Amo17g1821 190 PANTHER KINESIN-LIKE PROTEIN KIN-4B 43 79 - -
Amo17g1821 190 Coils Coil 85 129 - -
Amo17g1821 190 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 67 IPR016162 GO:0016491
Amo17g1821 190 Pfam Aldehyde dehydrogenase family 1 43 IPR015590 GO:0016491
Amo17g1821 190 SUPERFAMILY ALDH-like 1 46 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1821 Amo-Chr17 84231930 84233491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1821 1 61 Aldehyde Dehydrogenase Gene Family AT1G74920 68.750 4.84e-21 87.8