Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1783 ATGGTCAAGATCGGTTTAATTTATGTCTCAAGTGGCATATTTTTTGTGGCTCCTGTGGATAGGCGAAATAATCCAATCTATATGGATTTTTATACATCTCACTATGTTAAAGATATTATTGGTATATCTTTGTTAAAAGTAATTCAAGATAAGTTGGGGTTGAACTACTTTAATGGATTGGATGATGTTGCATATGGTATAAAAGATAATGGGATCCATGGGAATATGAAAAGTTCTAGTGTGCAAAGGATTCAGAAGAACAATTCCAATGAAACTACTATCAAGAAGAGGTCAATAACAAAAAAAAAAGAGGGTATATATATTGCTGGATATCATAGCAAAAGGTTGAGGTTGACTAAGTATGATATGAAAGCTGATCGATTTTATATTCCCTATGAGTTTGCTAGGTTACTACTTAACAGTGGAGGATCGAAAAATTGGAAATTTACTGTTAAGGACTCAGAGATTACTAAAACCTTTGTAATGCATGTCTTGAAAAGTAAAGGCAGGAATCGAGAGTACAAAATTGGTCATAAATGGAAAGATTTTGTGAGAATGCATAAACTTAGGACTGGATATTTACATGCATTTAGGAGTGTTTCGAAAGAAGATCATTTGATTCAGGTTTCTGTGATTAGAAAGTAA 645 0.3256 MVKIGLIYVSSGIFFVAPVDRRNNPIYMDFYTSHYVKDIIGISLLKVIQDKLGLNYFNGLDDVAYGIKDNGIHGNMKSSSVQRIQKNNSNETTIKKRSITKKKEGIYIAGYHSKRLRLTKYDMKADRFYIPYEFARLLLNSGGSKNWKFTVKDSEITKTFVMHVLKSKGRNREYKIGHKWKDFVRMHKLRTGYLHAFRSVSKEDHLIQVSVIRK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1783 214 Gene3D - 76 214 IPR015300 -
Amo17g1783 214 SUPERFAMILY DNA-binding pseudobarrel domain 115 211 IPR015300 -
Amo17g1783 214 Pfam B3 DNA binding domain 118 213 IPR003340 GO:0003677
Amo17g1783 214 ProSiteProfiles B3 DNA-binding domain profile. 113 214 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1783 Amo-Chr17 80873922 80875110 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Amo17g1783 B3 5.1e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1783 - K01465 adu:107489370 267.7