Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1781 ATGGATGGCCACAATGTGTGTGTTTTTGCTTATGGTCAAACAGGCACAGGAAAAACATTCACAATGGATGGTTCAAATGAGCAGCCTGGAATTATTCCGCGAGCTCTTGAAGAGCTCTTTCGTCAAGCATCTGTGGATAATTCATCTTCTTTTACCTTTTCAATGAGCATGTTGGAAGTTTACATGGGCAATCTCAGGGATCTGCTGGCTCCAAGACTGTGTAATAAAGCATATGAACCTATATCCACATCATGGACAAACGTCAATGAAGCGTCAAGCAGGTCACACTGCTTGACAAGGATAAACATTTTTCGCCATGGGGATGGTTTGGAAGCTAGAAGGGAAGTAAGTAGACTGTGGATGGTTGATCTTGGAGGCAGTGAACGGCTGCTTAAAACCGGAGCCAAAGGGCTAACAATGGACGAGGGCCGAGCCATTAATCTTTCCCTTTCGGCTTTAGCTGATGTCATTGCAGCTTTGAAGAGGAAGAGGTGCCATGTGCCTTACAGCATATTGATAATTTTTCTTGTATCAACTACGAACTCATAA 549 0.4372 MDGHNVCVFAYGQTGTGKTFTMDGSNEQPGIIPRALEELFRQASVDNSSSFTFSMSMLEVYMGNLRDLLAPRLCNKAYEPISTSWTNVNEASSRSHCLTRINIFRHGDGLEARREVSRLWMVDLGGSERLLKTGAKGLTMDEGRAINLSLSALADVIAALKRKRCHVPYSILIIFLVSTTNS* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1781 182 ProSiteProfiles Kinesin motor domain profile. 1 182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g1781 182 SMART kinesin_4 1 182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g1781 182 Gene3D Kinesin motor domain 1 76 IPR036961 -
Amo17g1781 182 PRINTS Kinesin heavy chain signature 3 24 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g1781 182 PRINTS Kinesin heavy chain signature 118 136 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g1781 182 PRINTS Kinesin heavy chain signature 86 103 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g1781 182 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 169 IPR027417 -
Amo17g1781 182 Gene3D Kinesin motor domain 77 172 IPR036961 -
Amo17g1781 182 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 82 169 - -
Amo17g1781 182 PANTHER KINESIN-LIKE PROTEIN KIN-14D ISOFORM X1 1 74 - -
Amo17g1781 182 PANTHER KINESIN-LIKE PROTEIN KLP-3 82 169 - -
Amo17g1781 182 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 74 - -
Amo17g1781 182 Pfam Kinesin motor domain 76 169 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo17g1781 182 Pfam Kinesin motor domain 1 72 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1781 Amo-Chr17 80583162 80584457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1781 1 169 Calmodulin-binding Proteins AT5G65930 39.806 4.99e-35 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1781 - - gmx:100785581 283.493