Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1743 ATGAGTTGCTTTTCATGTTTTTCAAGCCATGAAAAGAAGACAGAAAAGAGGTCAAGGAGGAGTGATCATAATAATCAACACCATAAAGCAGAAACGCCTCATCAACCTCTCAAGGAAAACAAGGCAAGGGGAGGCCAACAAACAGAATCTAAAATATTAAACAAAGAAGGAAACAAAGACACAGGAAGCAATAACATTGCTGCACAAACGTTCACTTTTCGTGAATTAGCTACTACTACAAAGAACTTCAGGCAGGAGTGCCTAATTGGGGAAGGTGGATTTGGTAGGGTTTATAGAGGACGACTTGAAAAGACAAACCAAGAAGTAGCTGTAAAGCAACTTGACAGGAATGGATTGCAAGGGAACAGAGAGTTCCTTGTTGAAGTGTTAATGTTGAGCTTGTTACACCATGAGAATCTGGTGAATCTAATTGGATATTGTGCTGATGGAGATCAAAGACTATTAGTATACGAGTACATGCCATTGGGATCTCTTGAGGACCATCTTCTCGATCTTCTTCCACAACAAAAGCCACTAGATTGGTTCAAAAGAATGAAAATAGCATTACACGCCGCAAAAGGGTTAGAATATCTTCACGACAAAGCCAATCCACCAGTGATCTACCGTGACTTAAAATCCTCAAATATTTTGCTGGATAGGGATTTCAATGCAAAATTATCAGATTTTGGACTCGCAAAGCTTGGACCAACAGGGGACAAGACTCATGTGTCTTCAAGAGTGATGGGAACTTATGGATACTGCGCTCCCGAGTATCAAAGAACTGGGCAGCTTACAGTAAAATCAGATGTCTATAGTTTCGGCGTTGTGTTGCTCGAATTGATCACCGGAAGGAGAGCCATTGATAATACTAGACCAGCAAGGGAGCAAAATCTAGTTGCCTGGGCATATCCAATATTCAAGGAACCAAGCAGATACCCAGAACTAGCAGATCCCTTTCTAGAAGGAAACTACCCAATGAGATCATTACACCAAGCAGTTGCAGTAGCAGCCATGTGCCTCAATGAAGAACCATCAGTGAGGCCATTAATCAGTGATGTTGTAACTGCCCTCAGCTTCCTAGGAACAACCCCAGTAGGCCAGGATGGGAATAACAATATCAGAATTGCACCCATTGACATGCCGTCACCGCCACTAGAGCGAGGAACAGACGTCGTTGGTGCCGCGGCGGGCAGTACGATCACTTTTAACTTAATGGATGATGATAGCATTGCTGAGCGACAAAGAGTTGTGGCTGATGCCATTGAATGGGTTTCCAATAACACAAGGAAATAG 1293 0.4285 MSCFSCFSSHEKKTEKRSRRSDHNNQHHKAETPHQPLKENKARGGQQTESKILNKEGNKDTGSNNIAAQTFTFRELATTTKNFRQECLIGEGGFGRVYRGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHENLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLLPQQKPLDWFKRMKIALHAAKGLEYLHDKANPPVIYRDLKSSNILLDRDFNAKLSDFGLAKLGPTGDKTHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDNTRPAREQNLVAWAYPIFKEPSRYPELADPFLEGNYPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTTPVGQDGNNNIRIAPIDMPSPPLERGTDVVGAAAGSTITFNLMDDDSIAERQRVVADAIEWVSNNTRK* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1743 430 SUPERFAMILY Protein kinase-like (PK-like) 69 365 IPR011009 -
Amo17g1743 430 Gene3D Phosphorylase Kinase; domain 1 53 159 - -
Amo17g1743 430 PANTHER OS07G0668900 PROTEIN 1 422 - -
Amo17g1743 430 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Amo17g1743 430 MobiDBLite consensus disorder prediction 1 65 - -
Amo17g1743 430 SMART serkin_6 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1743 430 Gene3D Transferase(Phosphotransferase) domain 1 160 368 - -
Amo17g1743 430 ProSiteProfiles Protein kinase domain profile. 83 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1743 430 CDD STKc_IRAK 89 357 - -
Amo17g1743 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Amo17g1743 430 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 1 422 - -
Amo17g1743 430 Pfam Protein kinase domain 85 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1743 430 MobiDBLite consensus disorder prediction 41 65 - -
Amo17g1743 430 MobiDBLite consensus disorder prediction 9 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1743 Amo-Chr17 75439206 75443003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1743 1 423 Glycoside Hydrolase AT3G07070 67.529 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Amo17g1743 Pkinase 7.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1743 - - gmx:100786405 640.573