Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1737 ATGGATGATGCTGCGGCTCCTAATCACTTAGCTTTGCTTGATTCATGCATCCAGCCATATCCAGTGAGGGAAAGAGTAACAAGGTCTGATTTGAAGCGCTTGTTATCTGATTTGGAATCAAGGAAGAATTTCCACATCAACTTTGTCACTGTTAGGAAACTCACGAGCAAAGCTGATGCTTTTGAGTATGCTGATCAAGTTTTGGAGCGTTGGTATCCTTCCATAGAAGAAGGCAACAACAAGGGTATTGTGGTTCTTGTCACAAGCCAGAAGGAAGGAGCAATCACCGGTGGCCCGGCTTTTGTCCAAGCTGTTGGAGAAAAGAGTGCTTTTGTTGGTGGTAAAGCCTCAGAAGGAGTTTTTGTTGGTGCTTTCCTTTCTATGTCTTCAACAGCAGTGGTCTTGAAGTTTTTGATGGACAAGAACACTATTAATGCCCTTCATGGACAAGTCACTATTGGGACCCTTATTTTGCAGGTGCATGTGATAGTGACAGCCACAACTATACAACGATAA 516 0.4341 MDDAAAPNHLALLDSCIQPYPVRERVTRSDLKRLLSDLESRKNFHINFVTVRKLTSKADAFEYADQVLERWYPSIEEGNNKGIVVLVTSQKEGAITGGPAFVQAVGEKSAFVGGKASEGVFVGAFLSMSSTAVVLKFLMDKNTINALHGQVTIGTLILQVHVIVTATTIQR* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1737 171 PANTHER UPF0603 PROTEIN OS05G0401100, CHLOROPLASTIC 25 108 - -
Amo17g1737 171 Pfam TPM domain 27 104 IPR007621 -
Amo17g1737 171 Gene3D - 24 110 - -
Amo17g1737 171 PANTHER UNCHARACTERIZED 25 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1737 Amo-Chr17 74931172 74934354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1737 94 159 Antiporters AT2G19600 62.857 7.40e-21 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1737 - - qsu:112009827 164.081