Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1730 ACAGGCGTTCGTCTATCTCCATCTCATCACCCGTCGTTAGCCTCTGTGACCACGATTACAGCGCCCCCTCTTTCCGCCTCCAACAGCAGTGTCGCCGCCGTCTCTCACGTCCTGAGCCTCCGTGACTCCTGTGTTCGCTGCCTCCGATCCACCAGCGTAGCGGCGTTCTCTATCACCACACCCCTGACATTAGTTATTTTTTGTCAAAATTTCATCATAAACATGAACATCGATGACAATAAAAACTTAGAGGTGTCTATCGAATGTGATGAGCTGTGTTTTGGGTATGATAGTAGTTCTGATAAGGAGGAGGAAGATCTTATCAACAATGAGGGTAAATTTAGTGAATCCATGGAGGTGTCGAATTGTAGCTATAAAATTCAAGAAGTTGAGAAGAAGTTAAACGAATTAAGCTATGATGACATGTGGGGTATTGAGTTTGATACCGTTGATCAATGTTGTGATTTTTATAGAAATTATGCTAGAGTGCACGATTTTGTTGCGAGGCTTGACGAAAAAGGACAAGATTTCAATGGAAACCTTAATATGCGACAGATGGTTTGTAACAGAGAGGGTACACGTAGAAAAAAGTACTTGGAGATGGAGAACAGGAAAAAGGATCACAAGCCAATCACACGCGTAATGTGTCAAGCAAKGATTAGATTTCACTATGACTTGATTTTACAAAAGTGGCGGGTCACCAAATTTGAAGAGACTCACAACCATGACCTCATCCCACCTAAGTATATCCAGTTCGTTCCGGCATATCGAACAATGACTGACGCTGATAAAGCACAGGCTGAT 804 0.4291 TGVRLSPSHHPSLASVTTITAPPLSASNSSVAAVSHVLSLRDSCVRCLRSTSVAAFSITTPLTLVIFCQNFIINMNIDDNKNLEVSIECDELCFGYDSSSDKEEEDLINNEGKFSESMEVSNCSYKIQEVEKKLNELSYDDMWGIEFDTVDQCCDFYRNYARVHDFVARLDEKGQDFNGNLNMRQMVCNREGTRRKKYLEMENRKKDHKPITRVMCQAXIRFHYDLILQKWRVTKFEETHNHDLIPPKYIQFVPAYRTMTDADKAQAD 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1730 268 Pfam FAR1 DNA-binding domain 155 245 IPR004330 -
Amo17g1730 268 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 95 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1730 Amo-Chr17 74659757 74661846 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g1730 FAR1 5.9e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1730 - - aip:107607226 407.912