Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1710 ATGAAAATGGCTTCCAATTCCAAAAAATGGAGTTACTTTTTTCAATTACTGCTTCTCTCTCTCACACTTTTCTTGCAGATAGCATCTCATAAAATTGAAGCAGGTGGTTCAAAAGTTGAATACCTTCCTGGTTTTGATGGTCCTCTCCCCTTTCAACTTGAAACTGGGTATGTGGGATTGGGAGATTCAGAAGATGACATGCAAGTTTTCTACTATTTTGTTAAGTCAGAAAATGATCCTAAAAATGACCCTCTTTTGCTTTGGTTAACTGGTGGACCTGGCTGTTCTTCAATTTCAGGCTTTGTCTTCCAAATAGGTCCAGTGCAATTTAAAGTTGAGGAATTTGATGGGAGCTTGCCTAAGCTAATCTACAGGGCATCGTCATGGACAAAGGTAGCTAATGTTATCTTTGTAGATTTACCGATGGGAACAGGGTTCTCTTACGCAAAAGATGTCCTTTCTCAACGAAGTGATTGGAAACTTGTTCATCATGCCCACCAATTTATTAGAAAGTGGCTCACTGAGAATCCAGAATATATTTCCAATGAATTTTACATGGCAGCTGATTCTTATTCTGGCATTCCTGCTCCTCCATTGGTTCAAGAAATTGCAAATGGAAATGAGAAAGGTCTTCAACCCCAAATAAATCTCCAGGGATACATACTAGGAAACCCCGTAACGACAAGTGAAGAAGGAAATGATCATATCCAATATGCTCATGGAATGGCACTTATTTCTGATGAACTCTATTTGTCATTGAAGAGAAATTGTAAAGGAGATTATCTAAATATAAATCCCGAAAATACATTGTGTTTAAGCGACATGGAGTATTACAATAAGTGCCTTGAAAAAATTGACCTCTATTTCATTTTGAATCCATATTGCAACGATGATTGGCTTAAGCAAGACCAAGGGATGCAAACGAGATCTCTGGCTAGAAAGCTTGAGGCCCGTTTCGAAACTCCTCTCATAGTGCCAGATATAGGCTGTGAGAATTTTCTTTTCTTTCTGGTCACTCAATGGGCCAACCACAGGAGCGTACGCAAGGCACTACACATTCGAGAGGGGACTATAGGGGAATGGGTACGTTGTTATAAAGATGATTATGAATTCAGCATCGTTAACAGTGTTCCCTTCCATGCAAATCTCAGTGCAAAAGGGTACCGTTCTTTAATTTTCAGTGGAGATCATGATGCAGTGGTTCCTTTTTTCTCAACTCAAGCATGGATAAGGTCTCTAAACTATTCCATTGTAGATGATTGGAGGCCATGGTATTTAAATGACCAAGTTGCAGGATACACCAGGACTTACTCAAATAAAATGACATTTGCAACTGTAAAGGGTGCAGGACATACAGCTGCTGAATTGAAGCCTAATGAAAGTTATGTCATGTTCACTAGATGGATATCTAATAGGCCTTTGTAA 1425 0.3916 MKMASNSKKWSYFFQLLLLSLTLFLQIASHKIEAGGSKVEYLPGFDGPLPFQLETGYVGLGDSEDDMQVFYYFVKSENDPKNDPLLLWLTGGPGCSSISGFVFQIGPVQFKVEEFDGSLPKLIYRASSWTKVANVIFVDLPMGTGFSYAKDVLSQRSDWKLVHHAHQFIRKWLTENPEYISNEFYMAADSYSGIPAPPLVQEIANGNEKGLQPQINLQGYILGNPVTTSEEGNDHIQYAHGMALISDELYLSLKRNCKGDYLNINPENTLCLSDMEYYNKCLEKIDLYFILNPYCNDDWLKQDQGMQTRSLARKLEARFETPLIVPDIGCENFLFFLVTQWANHRSVRKALHIREGTIGEWVRCYKDDYEFSIVNSVPFHANLSAKGYRSLIFSGDHDAVVPFFSTQAWIRSLNYSIVDDWRPWYLNDQVAGYTRTYSNKMTFATVKGAGHTAAELKPNESYVMFTRWISNRPL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1710 474 Pfam Serine carboxypeptidase 43 471 IPR001563 GO:0004185|GO:0006508
Amo17g1710 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Amo17g1710 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Amo17g1710 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 441 454 IPR001563 GO:0004185|GO:0006508
Amo17g1710 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 197 IPR001563 GO:0004185|GO:0006508
Amo17g1710 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 471 IPR001563 GO:0004185|GO:0006508
Amo17g1710 474 SUPERFAMILY alpha/beta-Hydrolases 39 473 IPR029058 -
Amo17g1710 474 Gene3D alpha/beta hydrolase 33 305 IPR029058 -
Amo17g1710 474 Gene3D - 336 474 - -
Amo17g1710 474 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 16 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1710 Amo-Chr17 72750655 72760906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1710 30 61 Calmodulin-binding Proteins AT2G22960 62.500 1.25e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1710 K16296 - gmx:100780069 681.789