Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1706 ATGGTGAAACCACCTTTCCATCCTCCTCAATTTCTTGATCTGCTCTCTTCAATCTGTCGCTCCCCTCATCGATCTCATGGTTCACAAATGAAAACCACAATCGCATGTTCTGCACTGAATCCACCTCTTAATCCTCTTCAATCTCTTGCTCCTCCTCTTCGATCTCTCCTTCATCACTGTCATCAAAGCCGCCGTCGCTGCCATCGTCACCATCAAGGTGAGATCTCTGCTCTAGGATCTGAATTGGAAACTCTCATGATTGAAGAGAAACTTCAATTGCACAAGAAAGTTCTTGCAACATTGAGGATCATGTCAAAACCAGTTAGGATGATCCCTGAGACTCTCTCTGTTCTTATCCAAGTTATGTCAATATATATAGATATACCTAACAGCACTTCTGATTCTGAGGCTCTACCAGGAAGTGGTGGTTCTAATGCTAACAACCAATGGCATAGTTTCTTCAAACTTCTCAAAAAAGGCTCACAAATGCAATTTCAACCATTTCACCTTCTTAAAAATAATGTTTCTAAGTTAACTAGAAGGAAGAGTAAGAGAGTTAGATATGATCTCATTCCTTCTTTTTTTGACTCTGAGTTTGCCAACTTCAAATCTTCATGGAAAAATTTCACTCTCTCTGAACTTCAGGCTGCAACTAATGACTTTAGCCATGATAATATAATCGGAGAGGGATGGTATGCAGAGGTATACTTAGGAAAATTAGAAGATGGAACCTTTGTTGCCATAAAGAAGCTAACAAGAGGGAACCAAGAAGAAATGGCTGCAGATTTTTTGTCTGAGCTTGGAATCATGTCTTATAATTTGATGTCTTCCAGTGAATTGAGCAAGTGTACTTTGAAAGTCACTGGCAACAAGTTAATGGTTCAGAATGTTCATAGAGTTTAA 903 0.392 MVKPPFHPPQFLDLLSSICRSPHRSHGSQMKTTIACSALNPPLNPLQSLAPPLRSLLHHCHQSRRRCHRHHQGEISALGSELETLMIEEKLQLHKKVLATLRIMSKPVRMIPETLSVLIQVMSIYIDIPNSTSDSEALPGSGGSNANNQWHSFFKLLKKGSQMQFQPFHLLKNNVSKLTRRKSKRVRYDLIPSFFDSEFANFKSSWKNFTLSELQAATNDFSHDNIIGEGWYAEVYLGKLEDGTFVAIKKLTRGNQEEMAADFLSELGIMSYNLMSSSELSKCTLKVTGNKLMVQNVHRV* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1706 300 ProSitePatterns Protein kinases ATP-binding region signature. 227 250 IPR017441 GO:0005524
Amo17g1706 300 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 ISOFORM X1 150 271 - -
Amo17g1706 300 PANTHER OS08G0249100 PROTEIN 150 271 - -
Amo17g1706 300 SUPERFAMILY Protein kinase-like (PK-like) 193 272 IPR011009 -
Amo17g1706 300 Gene3D Phosphorylase Kinase; domain 1 195 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1706 Amo-Chr17 72557251 72559967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1706 199 271 Receptor kinase-like Gene Family AT5G56890 42.466 7.55e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo17g1706 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1706 - - aip:107607219 296.204