Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1630 ATGTTCCGTTACGACCTCCTCGACGAGATGCAGAACAAGCTCGATTACATCCTCTCTCTCACCGTCGAGAACTTCCTTGAACGTCGCCTCCATATTCTCGTCTTCAAGTCTGGTATAGCGAAGTCCATCCACCAACCTAATTTTCTATCACTCATTTCAAAATTAAAGCCGCAGAGGAGGTTGATTGAGCTGGAGGCTTTGGAGAAAGTCATACATGAAAGAATAGATGCTCCCGGAGCACCTAGGCAGTGGTGGTTTGGCGGGGGGATTGACTTGACTCCTTACATTTTCGAGGAGGATGTTAAACACTTTCATTCGGTTGGTAAATTTTTCTCTTCAGCACAAAACAATGCTGTAGCTCAACAGAGGGAGCATGATGTCCAAACAACTGTTAAAGGGTCGATTGACAGCCCATTATTACTAGAACAAGAGACAACAGTGTTTTTGGCTAAGCAGGTTAAGCTGGGTTTTACCAGTGGTCTTGTTCCGAGAGAAAGAATATTGTTTCAAGAAAGACCACATTTGTGA 528 0.4413 MFRYDLLDEMQNKLDYILSLTVENFLERRLHILVFKSGIAKSIHQPNFLSLISKLKPQRRLIELEALEKVIHERIDAPGAPRQWWFGGGIDLTPYIFEEDVKHFHSVGKFFSSAQNNAVAQQREHDVQTTVKGSIDSPLLLEQETTVFLAKQVKLGFTSGLVPRERILFQERPHL* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1630 175 Gene3D Coproporphyrinogen III oxidase, aerobic 34 143 IPR036406 GO:0004109|GO:0006779
Amo17g1630 175 PANTHER VACUOLAR PROTON ATPASES 105 171 IPR002490 GO:0033179|GO:0046961|GO:1902600
Amo17g1630 175 Pfam Coproporphyrinogen III oxidase 78 112 IPR001260 GO:0004109|GO:0006779
Amo17g1630 175 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 105 171 - -
Amo17g1630 175 SUPERFAMILY Coproporphyrinogen III oxidase 75 115 IPR036406 GO:0004109|GO:0006779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1630 Amo-Chr17 67336267 67337442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1630 1 64 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 59.375 1.35e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1630 - - adu:107465882 174.096