Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1623 ATGACACCACCACCCTCACGTGACCAATTTCCGTTACTCTCTTCCCTTCTAACCTTCTTCCTTATTTTCAACATTACCAACTCCCAGCTTCACGATCAAGAACACCAACTCCTCCTGAGGATAAAACAGTACTTTCACAACCCACCTTCACTCTCTCACTGGACCCCCTCCTCCTCCACCTCCTCCTCCTCTCACTGTTCTTGGCCTGAGATCACCTGCAACAACGACGGTTCCGTCACCGGAATAACCATATCCAACGCCAATCTCAACCAAACAATACCTTCTTTCTTGTGTGACCTCAAGAACCTGACACGTGTCGATTTCAGCCAGAATTTCATTCCCGGCGAGTTTCCGATCACTCTCTACAACTGCTCTCAACTTCAATACCTTGATTTGCACATGAACAACTTCGTCGGAGAAGTTCCCGATGACATTGACACGCTGTCAAATTTGCAGTACCTGAATCTCGCTTCGACGAACTTCGCCGGCGACGTTCCGGCGGCAATCGGAAAATTGAAGGAGCTCAGAGTGCTTCGCCTTCAGTACTGTCTTTTTAACGGAACTTTGCCTGATGAGATTGGAGATTTGTCCAATCTTGAATTCTTGGATTTGTCAACAAACACCATGCTTCCTTCTACAACGCTGCCACCAAGCTGGACCAGGTTGAAGAAACTGAAGATTTTTTATGTGTTTGCATGCAACCTGGTTGGTGAAATTCCTGAAACAATTGGAGAAATGGTGGCTTTGGAGGAGCTTGATTTGTCGCAGAACAAGTTAACTGGACAAATTCCAAGTGGTTTGTTCAAGCCGAAGAATCTGAGCATTGTGTACCTTTCGAGAAACAAGCTCTCTGGAACGATACCTGATGTGATTGAAGCATCAAACTTGACCATCYTTGATCTAACAAATAATAACCTTACAGGGAAGATACCGAATGATTTCWGAAAGCTCGGAAACTTAAAGGGACTGAAATTGTCTTTGAATAGCTTGTCAGGGGAGCTACCTCAAAGCTTAGGCCATCTGCCAGCTCTGATCGATTTTCGTGTCTTCAGCAACAAGTTATCAGGTACTCTTCCCTCTGACTTTGGCCGCTACTCAAAGCTTGAAATCTTTCTTGCTGGAGACAATGATTTCACTGGAAATCTGCCAGAGGACTTGTGTTATTATGGTGTGTTGCATAATTTAACTGTCTCTGAAAATAATCTGAACGGGGAGTTGCCAGAGTCACTAGGAAATTGCAGAACCCTGCAGGAGCTGAAAATTCAGAAGAATGGATTTTCTGGTAGCATTCCTAGTGGCCTATGGACATCTTTCAATTTGTCTAATTTCATTGTGGCGCATAATAAGTTTAGTGGTGAGCTTCCTGAAAGATTGTCTGCTAATATTTCGCGCTTTGATATCGGTGACAATCAGTTTTCCGGTAGAATTCCTGCCGGCGTGTCTTCCTGGACCAATGTGGAATACTTTGATGCCAGCAAGAACAACCTTACTGGAAGTATGCCACCTGGGATCACTGCTCTTCCCAAGCTGCTATACCTCAATCTTCATCAGAACCAGCTCACTGGGCCACTTCCATCAGATATATTATCATGGAAGTCCCTAGAAATTCTAGTTTTGAGCCAAAACAAACTCTCAGGACAAATTCCAGTCACGATTGGCCGGTTACCAGCTCTTAATATGCTTGACCTCTCAGAAAATCAATTCTCTGGCCAAATTCCCTCTCTACCTTCAACACTCAGCAATTTCAATCTGTCCTCCAATCACTTGACTGGGAGGATTCCGAGTGAATTCGAAAATTCTGCATATGCTAGCTGCTTTTTGGACAACTCCGGCCTCTGTGCTGCTACTCGAGTACTTAACCTTGCTTTGTGTAATTCTAGCCCTCAAAGGCAAACCAAAGGCTCATCTTGGTCTCTTGGTTTGATTATAAGCCTGGTAGTTATAGCTATTTTCCTGGCTTCATTAGCTGCATTCTTGATTACCAGACTTTACAGCAAAAGAAAGTGTGGATTGGACAATTCATGGAAGCTCATTTCCTTTCAAAGGCTGAGTTTCAGAGAATCAAGCATAGTATCGTCATTGACAGAGAATAATATCATTGGCAGTGGTGGATACGGTACAGTGTACCGTGTGCCTGTTGATGGATTTGGCTATGTTGCAGTGAAAAAGATTTGGAATAACAGAAAGTTAAACCACAGGCTTGAGAGCTCATTTCACGCAGAAGTTAAGATATTGAGCAATATTCGTCATGGCAACATTGTGAAGTTGTTGTGCTGTATCTTCAATGAGGATTCTATGCTCCTTGTCTACGAGTACCTAGAGAATCATAGCCTAGATAAGTGGCTGCACAAGAAGAGCAAGTCATCATCCATGTCTGGTAAAGTCAATCATTTTTTTCTTGATTGGCCAAAGAGATTGCAAATTGCCATTGGTATTGCCCAAGGCCTAACATACATGCACTATGATTGCTCGCCGCCTGTGGTTCATAGAGATGTGAAAACAAGCAACATACTTTTGGATTCTCAATTCAATGCAAAAGTTGCAGATTTTGGTCTTGCAAAGATGATGATCAAGCCCCTTACCACCATGACAAGTGTTGTTGGCTCATTTGGATATATTGCTCCAGAATATGTTCAAACAACAAAAGTGAGCGAAAAGATCGATGTCTTCAGCTTTGGGGTTATACTATTGGAATTAACAACTGGAAAAGAAGCTAATTATGGAGATGAGCACTCATCTCTTTCAGAGTGGGCATGGCGCCACGTTCAGTTAGGAACCAATGTAGACGAACTGCTGGACACTGATGTCTTGGAGGCTAGTTACAGTGATGAAATGTGCAGTGTTTTTAAACTTGGGGTCATGTGTACTTCACCATTGCCTGCTGGTAGGCCTCAAATGAAGGAGGCTTTGCAACTGTTGCATCGATTCGGTGAAGGATATGAATTTGGAGAGAGGAATATTGGGAAAGATGAAATTATTCCCCTTATTAAGAATTCAAAAACGGAAYCAAGGCTGGATATTGACAATGATAGTGACTAA 3039 0.4297 MTPPPSRDQFPLLSSLLTFFLIFNITNSQLHDQEHQLLLRIKQYFHNPPSLSHWTPSSSTSSSSHCSWPEITCNNDGSVTGITISNANLNQTIPSFLCDLKNLTRVDFSQNFIPGEFPITLYNCSQLQYLDLHMNNFVGEVPDDIDTLSNLQYLNLASTNFAGDVPAAIGKLKELRVLRLQYCLFNGTLPDEIGDLSNLEFLDLSTNTMLPSTTLPPSWTRLKKLKIFYVFACNLVGEIPETIGEMVALEELDLSQNKLTGQIPSGLFKPKNLSIVYLSRNKLSGTIPDVIEASNLTIXDLTNNNLTGKIPNDFXKLGNLKGLKLSLNSLSGELPQSLGHLPALIDFRVFSNKLSGTLPSDFGRYSKLEIFLAGDNDFTGNLPEDLCYYGVLHNLTVSENNLNGELPESLGNCRTLQELKIQKNGFSGSIPSGLWTSFNLSNFIVAHNKFSGELPERLSANISRFDIGDNQFSGRIPAGVSSWTNVEYFDASKNNLTGSMPPGITALPKLLYLNLHQNQLTGPLPSDILSWKSLEILVLSQNKLSGQIPVTIGRLPALNMLDLSENQFSGQIPSLPSTLSNFNLSSNHLTGRIPSEFENSAYASCFLDNSGLCAATRVLNLALCNSSPQRQTKGSSWSLGLIISLVVIAIFLASLAAFLITRLYSKRKCGLDNSWKLISFQRLSFRESSIVSSLTENNIIGSGGYGTVYRVPVDGFGYVAVKKIWNNRKLNHRLESSFHAEVKILSNIRHGNIVKLLCCIFNEDSMLLVYEYLENHSLDKWLHKKSKSSSMSGKVNHFFLDWPKRLQIAIGIAQGLTYMHYDCSPPVVHRDVKTSNILLDSQFNAKVADFGLAKMMIKPLTTMTSVVGSFGYIAPEYVQTTKVSEKIDVFSFGVILLELTTGKEANYGDEHSSLSEWAWRHVQLGTNVDELLDTDVLEASYSDEMCSVFKLGVMCTSPLPAGRPQMKEALQLLHRFGEGYEFGERNIGKDEIIPLIKNSKTEXRLDIDNDSD* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1623 1012 Gene3D Phosphorylase Kinase; domain 1 676 772 - -
Amo17g1623 1012 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 1004 - -
Amo17g1623 1012 ProSiteProfiles Protein kinase domain profile. 694 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1623 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Amo17g1623 1012 Gene3D Ribonuclease Inhibitor 293 353 IPR032675 -
Amo17g1623 1012 SUPERFAMILY Protein kinase-like (PK-like) 689 973 IPR011009 -
Amo17g1623 1012 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 1004 - -
Amo17g1623 1012 SUPERFAMILY L domain-like 38 370 - -
Amo17g1623 1012 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Amo17g1623 1012 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Amo17g1623 1012 Gene3D Transferase(Phosphotransferase) domain 1 773 987 - -
Amo17g1623 1012 Pfam Protein kinase domain 696 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1623 1012 SMART LRR_typ_2 317 341 IPR003591 -
Amo17g1623 1012 SMART LRR_typ_2 196 222 IPR003591 -
Amo17g1623 1012 SMART LRR_typ_2 246 270 IPR003591 -
Amo17g1623 1012 SMART LRR_typ_2 507 531 IPR003591 -
Amo17g1623 1012 SMART LRR_typ_2 555 582 IPR003591 -
Amo17g1623 1012 Gene3D Ribonuclease Inhibitor 188 292 IPR032675 -
Amo17g1623 1012 Gene3D Ribonuclease Inhibitor 31 187 IPR032675 -
Amo17g1623 1012 SMART serkin_6 694 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1623 1012 SUPERFAMILY RNI-like 300 600 - -
Amo17g1623 1012 Gene3D Ribonuclease Inhibitor 354 620 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1623 Amo-Chr17 66326566 66331058 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1623 28 977 Receptor kinase-like Gene Family AT5G25930 50.104 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo17g1623 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1623 - - gmx:100798963 1310.43