Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1602 ATGGTGCCTTCCAAAAAGAGGACTTGTGGTTTCTACAACGCAAACAAATTTGCCAAGCTTGTGAGAAGAAGAGAGTTCATGGCCAGCACTACCGAGGGAACCACCGGGGCTCTTACCTGCCCCACTTGTGGCTGCCATAGAAACTTCCATAGAAGAAAGGAACTAGCTGCACCATCCAGTAAGACCAAATTAAAATTTAATGGCAAATTTGAATTTCTTATGAAAGAAATAATTAACTTATCCCAAGCTTGA 252 0.4206 MVPSKKRTCGFYNANKFAKLVRRREFMASTTEGTTGALTCPTCGCHRNFHRRKELAAPSSKTKLKFNGKFEFLMKEIINLSQA* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1602 83 Pfam ZF-HD protein dimerisation region 24 54 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1602 Amo-Chr17 63595680 63596478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1602 24 53 ZF-HD Transcription Factor Family AT1G74660 66.667 1.40e-10 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Amo17g1602 ZF-HD_dimer 1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1602 - - adu:107468004 72.7886