Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1551 ATGAAGGTGCCACGAGTAGAGTCAAAGTTAAGAGTATTCTCTTTCAAGATTCAATTTCTGTCTCAGGTTACAGAATTTAAGAAGAGTTTAAAAGCTGTGAACTCTGCTTGTGAAGAGGTCCGAAAGTCTGTCAAGCTGAAGATCATGAAGAAAATTCTTTTTGGGATCCACAATTGGATTCAAGACTTCAAGTTGGATAGTCTTTTAAAGCTTACTGACACTCGTGCTTCTAACAATAAGATGACACTGATGCACTATCTTTGCAAGGTTCTAGCTGATAGGTCGCCTGGACTGCTTGACTTCCACTTAGACCTTGTAAGCATGGAAGCTGTGACTAAGGTGATGATTTATGCTTGGTTGGAAAAAYAAAATTATTCAACTGCTAATTGCTAG 393 0.3842 MKVPRVESKLRVFSFKIQFLSQVTEFKKSLKAVNSACEEVRKSVKLKIMKKILFGIHNWIQDFKLDSLLKLTDTRASNNKMTLMHYLCKVLADRSPGLLDFHLDLVSMEAVTKVMIYAWLEKXNYSTANC* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1551 130 Gene3D Formin, FH2 domain 1 124 IPR042201 -
Amo17g1551 130 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 130 IPR015425 -
Amo17g1551 130 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 116 - -
Amo17g1551 130 PANTHER FORMIN-J 1 115 - -
Amo17g1551 130 Pfam Formin Homology 2 Domain 1 115 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1551 Amo-Chr17 59100847 59101700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1551 1 122 FH2 protein (formin) Gene Family AT5G07740 62.595 1.12e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1551 - - adu:107468267 187.193