Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1534 ATGGCAGCAACCTCCACGGAATCCACCGCTGGTGCTCTGCCGGAGCTGACCAACCGAACTACATTTCTAGGTCTGAAGCTGTACGTGTTAGTGATGGTTTTTTTGGCGATCGTGGTGGCATTGTTGATCGTGATTTATGTGTGCTTTTGGCGTAGCAGCAGAAGCTCGAAGAAGGGGAAAATGCGAGTGAAGCACAGCTCAGGCGGGATCCCACTGGTTTCAAAGGAGATTGTGGAGGTTAATGCATTGGATCTCGCGGATCATCTCAAAATGGAAAAAGAAGAAGAAGAAGAAGAAGACACGGTCGTTGATGTTGATCCTAATCGGAAGCAAGAACAGAAGCAGCAGAAGAAGGAGAAGGAGGAATGTGAGATCAAGGTTGAGGGAATAATAAAAGGGAGTAAGAAGAGGAGGGAGGAGGAGTCGGTGGAGTCTTCGCCGAACATAGGGTGGGGGCGGTGGTACAGCATGTCAGAAGTGGAAGAAGCGACGGATGGGTTTGCGGAAGGGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTACAGAGGTGTTCTTGGCGACGGTTCTATCGTCGCTGTCAAGAATCTTCTTAACAACAAGGGCCAAGCAGAGAAAGAGTTTAAGGTGGAGGTTGAGACCATTGGAAAAGTGAGGCATAAGAATTTGGTACGTTTAGTTGGATACTGTGCACAAGGTGCTAAGAGGATGCTTGTTTATGAATACGTTGATAATGGAAATTTGGAGCAGTGGCTACATGGGGATGTAGGCCCTGTTAGCCCCTTGACATGGGATATACGAATGAGGATTGCTGTTGGAACCGCCAAAGGATTAGCCTACTTGCATGAAGGCTTAGAACCCAAAGTTGTGCACCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAATTGGAATGCCAAAGTATCTGATTTCGGACTGGCCAAACTCTTAGGCTCAGAGAAAAGCTATGTCACAACGCGTGTAATGGGAACATTTGGATATGTTTCACCTGAGTATGCAAGTACAGGAATGCTCAATGAGTGCAGTGATGTGTATAGCTTTGGGATGCTACTAATGGAGCTAATTACAGGAAGAAGTCCTATTGATTATTCCAGACCACCTGCAGAGATGAACTTGGTTGACTGGTTTAAGGGAATGGTAACAAGTCGTCGTGGCGATGAGCTAGTCGATCCTTTAATTGAGATTAAACCCTCTCCAAGATCTCTGAAGCGAGCTTTGCTGGTTTGTTTGCGCTGTATAGACTTGGATGTCATTAAGCGACCAAAGATGGGTCAAATTGTTCACATGCTTGAAGCTGACGATTACCCATTTCGTTGTGAGGTTCATACATATAGAGAGAAAGACCCTTCTCCTTCTCATACAACTGTTGCTTTTCCAACAAGGCAGGTGGAGTCAGTACATAAACCAAGCTGGAGGAGATGA 1446 0.4585 MAATSTESTAGALPELTNRTTFLGLKLYVLVMVFLAIVVALLIVIYVCFWRSSRSSKKGKMRVKHSSGGIPLVSKEIVEVNALDLADHLKMEKEEEEEEDTVVDVDPNRKQEQKQQKKEKEECEIKVEGIIKGSKKRREEESVESSPNIGWGRWYSMSEVEEATDGFAEGNVIGEGGYGIVYRGVLGDGSIVAVKNLLNNKGQAEKEFKVEVETIGKVRHKNLVRLVGYCAQGAKRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMRIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKNWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVSPEYASTGMLNECSDVYSFGMLLMELITGRSPIDYSRPPAEMNLVDWFKGMVTSRRGDELVDPLIEIKPSPRSLKRALLVCLRCIDLDVIKRPKMGQIVHMLEADDYPFRCEVHTYREKDPSPSHTTVAFPTRQVESVHKPSWRR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1534 481 PANTHER OS03G0227900 PROTEIN 15 455 - -
Amo17g1534 481 Gene3D Phosphorylase Kinase; domain 1 130 242 - -
Amo17g1534 481 SMART serkin_6 167 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1534 481 CDD STKc_IRAK 173 439 - -
Amo17g1534 481 ProSitePatterns Protein kinases ATP-binding region signature. 173 195 IPR017441 GO:0005524
Amo17g1534 481 PANTHER OS01G0323000 PROTEIN 15 455 - -
Amo17g1534 481 Gene3D Transferase(Phosphotransferase) domain 1 243 450 - -
Amo17g1534 481 ProSiteProfiles Protein kinase domain profile. 167 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1534 481 MobiDBLite consensus disorder prediction 91 118 - -
Amo17g1534 481 MobiDBLite consensus disorder prediction 103 118 - -
Amo17g1534 481 SUPERFAMILY Protein kinase-like (PK-like) 143 440 IPR011009 -
Amo17g1534 481 Coils Coil 79 99 - -
Amo17g1534 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 289 301 IPR008271 GO:0004672|GO:0006468
Amo17g1534 481 Pfam Protein kinase domain 169 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1534 Amo-Chr17 56383223 56386862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1534 145 439 Receptor kinase-like Gene Family AT4G02010 47.492 9.76e-92 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Amo17g1534 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1534 - - gmx:100779420 662.529