Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1472 ATGGAGGATAAGCCAGCTTTCATATTCGATGTCGAAGACAGAGCACTCTTCTGTAAGGATTGTGATGAACCAATTCATTTAGCTGGCAGCCTTTCTGCGAACCACCAGCGGTTTCTCGCTACTGGAATCCGGGTGGCTTTGGGTTCTAATGACTGCTCCAAAATTCCAAGGAAAGTCCCTTCTCAGCAATCGCCTAGCTTCACTCCCCCTAGCTTTTGGGCAGTTGATCAACTATTGGATTTACCAGAGTTTGGATCACCAGAGAAAAAACAAGCAGACGAATTTGGAGAGTTGGAATGGCTAGCAGATGAAACACTAGCTGCAGCTGAAGTTCCTCAGCTTCCTGTGTCACACACTAGCACTCTTGCACCATACACTTTTAAAGCCACTAATAAATATTACATGTCTAGCAAAAAGCCTAGGATTGAAGTCTTAGGTGAAATAGATGATGAGCATTTCACTGTGCCTAATCTAGGCTAA 480 0.4417 MEDKPAFIFDVEDRALFCKDCDEPIHLAGSLSANHQRFLATGIRVALGSNDCSKIPRKVPSQQSPSFTPPSFWAVDQLLDLPEFGSPEKKQADEFGELEWLADETLAAAEVPQLPVSHTSTLAPYTFKATNKYYMSSKKPRIEVLGEIDDEHFTVPNLG* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1472 159 PANTHER B-BOX ZINC FINGER PROTEIN 24 2 159 - -
Amo17g1472 159 PANTHER B-BOX ZINC FINGER PROTEIN 22 2 159 - -
Amo17g1472 159 CDD Bbox1_BBX-like 2 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1472 Amo-Chr17 50562733 50565844 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1472 2 89 Orphan Transcription Factor Family AT1G06040 47.222 2.48e-22 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1472 - - gmx:100779183 196.052