Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1464 ATGAGAAGCTCAACTGTATCGAAGAATCGCAACGGCCTTGGTTCCATGTTACAAGTAAATGTGAATGTGAATTTGCAGCAGGCGTATCATGATGACATGATGAAAAATAGTAATGATGAATCCTCTAACAGTAACAGCAGTCCCTACTACAAAGGCCTCACCGATCAATCCCTTGCCATCTTTGCACCCTCATCTCCACCTCATCCTCATCATCATCATGATCATGCTACCATTCCTTGCTACCCTATTACTCCTCTTCCTCTCCCCAGCCATCATCCTCACCTCTCATCATCCGGATCTGGAGCGCAGGGGCAAAGTCCGTACTACAAGGGTCTTACCGATTATTCCCTTGTTATTGGTTCTTGGAGCAGCCACAATCCTACTTCCACCAATCCATCATACCACCTTCAGTCTAGCCCTTACTACAGGGGCCTCACGGATTTCTCCCTTGTCCTTCACGATCATCCTCAAGAGACAGAGATTGATCCCAATGATGGTGAGGTTGAGGGCGACTTAGTACTGATCCAAGAAGATCATAAGACAGTATTAACACAAGAGGATATTGCCAAAGGGGTTCTATTAGTGGCCACCCATGAAGAAGATGATTTACAAGACACAAGGACGAAGGAGGATATTTATCATCATCATCAGGAAATAACATCACTACACGAGGACCCAAATGTATACCAATATGAATGGGCAACCAAACACCAGCCCCAAACCTTGGAAGAATTCATCTGCAACTCTGATAAAGCACTCCAACTCCAAGCATTAGTAAGAGAGGGTTGTGGCTGTAATCATTTTATATTTGAGGGACCCCCCAACGTAGGAAAGAGATCCATGATCCGGGCTATGCTTCGCGACCTATTCGGCCCTCAGAGACTGCAGGTCATAGAAGAATCCAGAGACTTCACCTTGAAGGGAGAAATGGTTGACAAGCTGCAAGTGCAGATAAAAAAATCACTGCATCATGTGGAGATCAATGTCTCACAGACAAAGGGATACGAAAAGCACGTAATTGTTGATTTGTTCAACGGAACATATGCCAAGACGATAAATAACTCCCTGCCTTGTAGCCCAGATAACTGCCAAGGTGCGCTCTCTGACTTATATATATATCTATTCTGA 1128 0.4468 MRSSTVSKNRNGLGSMLQVNVNVNLQQAYHDDMMKNSNDESSNSNSSPYYKGLTDQSLAIFAPSSPPHPHHHHDHATIPCYPITPLPLPSHHPHLSSSGSGAQGQSPYYKGLTDYSLVIGSWSSHNPTSTNPSYHLQSSPYYRGLTDFSLVLHDHPQETEIDPNDGEVEGDLVLIQEDHKTVLTQEDIAKGVLLVATHEEDDLQDTRTKEDIYHHHQEITSLHEDPNVYQYEWATKHQPQTLEEFICNSDKALQLQALVREGCGCNHFIFEGPPNVGKRSMIRAMLRDLFGPQRLQVIEESRDFTLKGEMVDKLQVQIKKSLHHVEINVSQTKGYEKHVIVDLFNGTYAKTINNSLPCSPDNCQGALSDLYIYLF* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1464 375 PANTHER OS10G0574500 PROTEIN 160 351 - -
Amo17g1464 375 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 160 351 - -
Amo17g1464 375 Gene3D - 231 362 IPR027417 -
Amo17g1464 375 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 292 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1464 Amo-Chr17 49538297 49540279 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1464 233 350 Core DNA Replication Machinery Family AT5G27740 31.092 8.17e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1464 K10756 - aip:110268739 431.795