Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1462 ATGTTGTCAAATATTTCCCTTCTATTCTTAACCAACCATTTTCAGGAGGACATGCTTATAGTACAAGATGAAATATTTGGCCCTGTGATGTCACTAATGAAATTCAAGACTATTGAAGAGGAAATTATGAGGGCTAATAACACCAAGTATGGGCTAGCAGCAGGAATTGTGACAAAGAATTTGGATATTGTAAACACAATGTCCAGATCCATTCGTACAGGCATTGTTTGA 231 0.3636 MLSNISLLFLTNHFQEDMLIVQDEIFGPVMSLMKFKTIEEEIMRANNTKYGLAAGIVTKNLDIVNTMSRSIRTGIV* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1462 76 SUPERFAMILY ALDH-like 14 76 IPR016161 GO:0016491
Amo17g1462 76 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 13 76 - -
Amo17g1462 76 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 3 76 IPR016163 GO:0016620
Amo17g1462 76 Pfam Aldehyde dehydrogenase family 13 76 IPR015590 GO:0016491
Amo17g1462 76 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 13 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1462 Amo-Chr17 49519314 49519622 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1462 16 76 Aldehyde Dehydrogenase Gene Family AT3G24503 72.131 2.31e-26 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1462 K12355 - ahf:112766661 108.227