Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1434 ATGAAATCATCATCACAAGTGAGTACCAACATAGTGAAGCTCACGGAGTCGTTCTCCCATTCGACGGTTTCGGCAGCAAGTTCACAAGTGCAAAAATCATCAATGGCCTTGTTTGGTGGGTTATTGGGTCAATACCAGAAGAGAAGGCTTCTCTTCACTGTAGAAGAAAGCAATAATAATAAAGGAGGCAATAACAAAGTTAACCCCTGGCTTGAATCAATGAGAGCTTCTTCTCCTACACGAATCACACCCAACAACAATAACAACCAAGACGATAGCAACAACAACCCCTCTTGGATCGTTGGTCATCCATCTGCGCTGAAGATGTTTGATGAGATGATATGGAACTCGAAAGGGAAGCAAGTTGTTGTGTTTCTTGATTACGATGGAACTCTTTCTCCAATTGTTGCAGATCCAGAGAAAGCATTCATGACTAAAAAGATGAGAGCAATACTAAAGGACATAGCAAGACTATTTCCCACTGCCATAGTAACCGGAAGGTGTATTGACAAGGTATACGATTTTGTAAGATTGGGAGAAGTGTACTATGCTGGAAGTCACGGTATGGACATCAAAGGACCAACAAAAAGCCGCAATCATCAGAAAGGTAACAATAATGAAGCATTAGTGCTCTTCCAACCTGCGAGTCAATTCTTGCCCATGATCAACGAGGTGTACAAGATCTTGGTAGAAAAAATGAAGGCTATCCCAGGGGCTAAAGTAGAAAACAACAAGTTTTGTCTGTCCGTGCACTTTCGATGTGTTGAAGAAAAGTGCTGGTCAGCCTTGGCGGAACAAGTTAATTCAGTGCTCAAGGAGTACCCAAAACTTAAGTTAACACATGGGAGAAAAGTTATTGAGATTCGTCCAACTATAAAATGGGACAAAGGCAAGGCTATTGAATTCTTGTTAGAGTCACTAGGCTATGCAAATTCTACCAGCGTATTTCCCATCTATATTGGTGATGATACAACTGATGAGGATGCTTTTAAGGTTCTACGTAGTAAGGGCCAAGGAATTGGGATTCTTGTTTCTCAAATTCAAAAAGAAACTAACGCTATCTACACTTTGCATGATCCTTTAGAGGTTGGACAATTTTTAAGGCGTTTGGCAGATTGGAAAAAAAACAAGTTCTAG 1137 0.4072 MKSSSQVSTNIVKLTESFSHSTVSAASSQVQKSSMALFGGLLGQYQKRRLLFTVEESNNNKGGNNKVNPWLESMRASSPTRITPNNNNNQDDSNNNPSWIVGHPSALKMFDEMIWNSKGKQVVVFLDYDGTLSPIVADPEKAFMTKKMRAILKDIARLFPTAIVTGRCIDKVYDFVRLGEVYYAGSHGMDIKGPTKSRNHQKGNNNEALVLFQPASQFLPMINEVYKILVEKMKAIPGAKVENNKFCLSVHFRCVEEKCWSALAEQVNSVLKEYPKLKLTHGRKVIEIRPTIKWDKGKAIEFLLESLGYANSTSVFPIYIGDDTTDEDAFKVLRSKGQGIGILVSQIQKETNAIYTLHDPLEVGQFLRRLADWKKNKF* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1434 378 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 9 375 - -
Amo17g1434 378 CDD HAD_TPP 123 364 - -
Amo17g1434 378 Pfam Trehalose-phosphatase 125 359 IPR003337 GO:0003824|GO:0005992
Amo17g1434 378 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 9 375 IPR044651 GO:0004805|GO:0005992
Amo17g1434 378 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 124 334 IPR006379 -
Amo17g1434 378 Gene3D - 124 357 IPR023214 -
Amo17g1434 378 MobiDBLite consensus disorder prediction 77 98 - -
Amo17g1434 378 Gene3D - 204 291 - -
Amo17g1434 378 SUPERFAMILY HAD-like 123 374 IPR036412 -
Amo17g1434 378 TIGRFAM T6PP: trehalose-phosphatase 119 371 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1434 Amo-Chr17 47951141 47955099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1434 124 335 Trehalose Biosynthesis Gene Families AT1G23870 24.545 5.25e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1434 K01087 - gmx:100785139 493.812