Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1423 ATGGATCATCCAAATATCGTTTGTCAGAAGCATCATTTCTTTTCCACTATAAGTACCGAAGGAAATAATTCTTTCCTTTTCACTTTTCATACATATTTGGCACACATCCAGATTTTCATGGGGCTGGCTTATATCCACACAATTCTTGGAGTATGCCACAGAAATTTGAAGCCACAAAATATACTGATTGGCTTAATATGCTTTCTAAATGGACTTTATAACTCTGATGTCATTCTTGTATTTTCCCTGGTTGACCTTATTACAAACAGGTTAAGATATGTCAAAGGAGAAACTAATATATCATATATATGTTCCCAGTTCTATCGCGCACCAGCATTCTTATTTAGTGCTACTGAGTATGCTACTTCAACTGATATTTGGTCAACTGATTGTGTCCTTGCTGAACTACTTTTGAGCCTGGTTTATATCTGCTTTTTCTTTGGGTATTACAACGTGGCTTTTACTGCAAATCATGCAAACAATCTTTGA 489 0.3538 MDHPNIVCQKHHFFSTISTEGNNSFLFTFHTYLAHIQIFMGLAYIHTILGVCHRNLKPQNILIGLICFLNGLYNSDVILVFSLVDLITNRLRYVKGETNISYICSQFYRAPAFLFSATEYATSTDIWSTDCVLAELLLSLVYICFFFGYYNVAFTANHANNL* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1423 162 Gene3D Transferase(Phosphotransferase) domain 1 34 139 - -
Amo17g1423 162 SUPERFAMILY Protein kinase-like (PK-like) 2 141 IPR011009 -
Amo17g1423 162 ProSiteProfiles Protein kinase domain profile. 1 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1423 162 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 33 139 - -
Amo17g1423 162 PANTHER SHAGGY-RELATED PROTEIN KINASE ETA 33 139 - -
Amo17g1423 162 Pfam Protein kinase domain 27 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1423 Amo-Chr17 46831561 46832468 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1423 37 137 MAP Kinase Gene Family AT1G10210 35.644 1.94e-14 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Amo17g1423 Pkinase 3.3e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1423 K14502 - sly:101249039 125.946