Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1410 ATGGAGTCACCTGCAAATGGAGTAGTAGAGTCTTTATCAGAGGTTCAGAATTCAGTTTCTGTTGCACAGCAGCATGATCCTCCTTCTACATCCGGGACTCCCCGTCCTACGCGGCCTCCTTTAAGACCATCTCGGAATCATATTTATGAACTCAATTGTTCCACAGTTGGGGTTTTTGATGTACCTCTAATCACTCCAGTCCCTATTTGTAGCGAAACATGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTAGAGTATTTACTTTTGCTTGGGATCATCTACAGAGACCTTAAACCCGAGAACGTGTTGGTGAGGGAAGATGGTCATATAATGCTGTCGGATTTTGACCTCTCTCTAAGGCCTAGGGGAAGTGAGGCATTACCTGCTGGTATAGTGTCCAGTACTTCCAGCTTTGAAACGCGACCTCTATGGGATATTCCTGCCGTAAGGAAGAAGCATCATCAGCGGAGACAAGTTGCATATGTGGAAAAGGTTCACAAGGCCTAG 507 0.4556 MESPANGVVESLSEVQNSVSVAQQHDPPSTSGTPRPTRPPLRPSRNHIYELNCSTVGVFDVPLITPVPICSETWFYVAEVLLALEYLLLLGIIYRDLKPENVLVREDGHIMLSDFDLSLRPRGSEALPAGIVSSTSSFETRPLWDIPAVRKKHHQRRQVAYVEKVHKA* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1410 168 SUPERFAMILY Protein kinase-like (PK-like) 72 123 IPR011009 -
Amo17g1410 168 Gene3D Transferase(Phosphotransferase) domain 1 72 119 - -
Amo17g1410 168 MobiDBLite consensus disorder prediction 9 31 - -
Amo17g1410 168 ProSiteProfiles Protein kinase domain profile. 1 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1410 168 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Amo17g1410 168 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 75 124 - -
Amo17g1410 168 Pfam Protein kinase domain 73 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1410 168 MobiDBLite consensus disorder prediction 1 45 - -
Amo17g1410 168 PANTHER FLIPPASE KINASE 1-RELATED 75 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1410 Amo-Chr17 45502000 45504130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1410 73 120 AGC Kinase Gene Family AT2G36350 85.417 6.36e-23 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Amo17g1410 Pkinase 1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1410 K08286 - qlo:115952794 83.5741