Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1397 ATGCTTAGATCTTCTGCTTCTGTGTCATCTTCCACGATGGGTTCTTTTGCTGAGCGTGGTTTTGGCGGGGACGCGGTGACACTAGCTGAGGAGATCTGGAAGGCGTGTGAGCGGGAGTCTCTGGAAGCTTCGATTGAAGCTGCGTTCGAAGCTATCAGATCTCGTGAAATTGATTCTTATGTTCCAAGTCATTGCGAATGGTTATCTGTCCACAGAAACTTTGTTCGACACTATTTGGCATTCACCAATCGCCACAGAAGTGTTACCCAAACAAGAGCTACTCTTGTATTTATTTTTGGGTTCTGGATGCTGGATCTTGCCAACAACACTGTGCAGGGACCAGCTCGGACACTTTTGGCTGACCTTTCAGTTGGCAATATCCTGGGATATTCTGCTGGTGCTAGTGGAAAGTGGAATAGGTACAATTTTAAATTGTTTGCAACATTTTTGTGGAGGTTTTAA 462 0.4524 MLRSSASVSSSTMGSFAERGFGGDAVTLAEEIWKACERESLEASIEAAFEAIRSREIDSYVPSHCEWLSVHRNFVRHYLAFTNRHRSVTQTRATLVFIFGFWMLDLANNTVQGPARTLLADLSVGNILGYSAGASGKWNRYNFKLFATFLWRF* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1397 153 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 85 141 - -
Amo17g1397 153 PANTHER SUGAR TRANSPORTER 85 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1397 Amo-Chr17 44899790 44902472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1397 75 141 Sucrose Transporter Gene Family AT2G02860 51.724 1.10e-19 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1397 K15378 - csin:114307984 88.5817