Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1381 ATGAGGAAGAAGCACAAACCCTCCACGAGTAATACCACTGCTATGAAGAGGATGATGAGGAATCCTTATGAGTATCACCACAATCTGGGTATGAATTACACACTTATAACTGACAATCTCATTGTGGGATCCCAATCACAGAAACCTGAAGACATCAATCACCTCAAGAAGGAAGAAGGTGTGACATACATTCTGAATTTGCAGCAAGATAAGGATGTAGAATATTGGGGAATAGACTTGAAGTCGATAAAAAGGAGGTGTCACAAACTCGATGTTCGAAATATGAGGAGGCCGGCAATATACTTTGATCCAAACTTCTTACGAAATATTCTACCTAAAGCAGTTTCATCATTGGAATGGGCAATCTCAGAGGGAAAAGGAAGAGTTTATGTGCATTGTACTGTTGGACTTGGAAGAGCACCAGGGGTGACAATAGCTTATTTGTTCTAA 450 0.4022 MRKKHKPSTSNTTAMKRMMRNPYEYHHNLGMNYTLITDNLIVGSQSQKPEDINHLKKEEGVTYILNLQQDKDVEYWGIDLKSIKRRCHKLDVRNMRRPAIYFDPNFLRNILPKAVSSLEWAISEGKGRVYVHCTVGLGRAPGVTIAYLF* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1381 149 Pfam Dual specificity phosphatase, catalytic domain 53 148 IPR000340 GO:0008138|GO:0016311
Amo17g1381 149 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 108 149 IPR000387 GO:0016311|GO:0016791
Amo17g1381 149 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 10 149 - -
Amo17g1381 149 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF2, CHLOROPLASTIC 10 149 - -
Amo17g1381 149 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 25 148 IPR029021 -
Amo17g1381 149 Gene3D Protein tyrosine phosphatase superfamily 15 149 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1381 Amo-Chr17 44031904 44032893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1381 13 149 Protein tyrosine phosphatase (PTP) family AT3G10940 77.372 1.15e-78 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1381 - - aip:107607177 311.227