Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1379 ATGTGCTTTACACCAAATAAAGTCAAACACCTAATCTTATCCTACAAACCTTACTTAAAGATTCTAGCTGCAAAGATTAGCTGCATATTGCTGATAAGAGAAGAAGAGTTCACTAGTCTTATCAAAAGAATCATTGCTGCAACAAATAATAATAATGGATCTCCTGTGAACCTCACCCAAGAGGTGTTTTCAACTATATACATTGTCACTTCAAGGGCCGCATTTGGCATGAAATTCAAAGATAAAAAAAGATTCATATCGCTGGCAAAAGAATTGGCGAAGGTGGGGACTAGTTTTTCTTTAGGAGATTTGTTTCCATCAGCTAAATGGCTTCAACTTGTCTCTGGCTTGAGGCCTAAGATTGAGAAGTTGCATGGAAAAACAGATCAGATACTGCAAAGCTTCATCAATGGACATAAAGAGGCTAAGTCATCAAAATCCAAAGAAGGACAAGGTGAAGTTAAAGGTCTTATAGATGTTCTCTTAAGATTTGAGGATGGTAATGGATCAAACCAAGATTTCTCCTTAACTAGTAACAATATCAAGGCCATAATCTTGAATATCTTTGGTGCTGGTGGTGGGACAACATCAACTACAATAGATTGGGCAATGGCAGAAATAATGAAGGACCCAACAATAATGAAGAAAGCACAAGTTGAGGTGAGAGAAAACTTCAGTAAGAAAGGAAATGTTGATGAAACTTGCCTCTATAAACTCAAATATTTGAAATCAGTGCTCAAAGAGACTCTCAGATTACACCCTTTAGTTCCTCTTTTTCTCCTAAGAGAATGCAGATCCGAATGTGATATAAATGGTTATCACATACCTGAAAAGAGTGTGGAGATTAAAATGAAGCTAAAAGTATGTTTAAGAAACTCTAACCACCACCCTAGAATCAATCAGTGCACTAACCTGATATCTTTCATGAAAAGCTGTTTGGGCTTTTCCACCAAACTTGATATCATCTCGGAGTATCTGCTCCTCACTCCTCAGCCAAGTAGGTCATAG 1008 0.373 MCFTPNKVKHLILSYKPYLKILAAKISCILLIREEEFTSLIKRIIAATNNNNGSPVNLTQEVFSTIYIVTSRAAFGMKFKDKKRFISLAKELAKVGTSFSLGDLFPSAKWLQLVSGLRPKIEKLHGKTDQILQSFINGHKEAKSSKSKEGQGEVKGLIDVLLRFEDGNGSNQDFSLTSNNIKAIILNIFGAGGGTTSTTIDWAMAEIMKDPTIMKKAQVEVRENFSKKGNVDETCLYKLKYLKSVLKETLRLHPLVPLFLLRECRSECDINGYHIPEKSVEIKMKLKVCLRNSNHHPRINQCTNLISFMKSCLGFSTKLDIISEYLLLTPQPSRS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1379 335 PANTHER CYTOCHROME P450 71B11-RELATED 30 280 - -
Amo17g1379 335 Pfam Cytochrome P450 32 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1379 335 PRINTS E-class P450 group I signature 200 226 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1379 335 PRINTS E-class P450 group I signature 180 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1379 335 PRINTS E-class P450 group I signature 243 261 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1379 335 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 30 280 - -
Amo17g1379 335 Gene3D Cytochrome P450 7 301 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1379 335 PRINTS P450 superfamily signature 191 208 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1379 335 PRINTS P450 superfamily signature 244 255 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo17g1379 335 SUPERFAMILY Cytochrome P450 32 279 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1379 Amo-Chr17 43800548 43802079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1379 25 279 Cytochrome P450 AT3G26310 35.000 1.25e-42 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1379 - - gmx:100801936 313.923