Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1374 ATGAATTCTCAAATATCTAGGAGAGTCTTGTATATTCTGTACAGATATCCTATATCTGTATTTGGTGGGTTAGTTCAATTTCAAACGAAATACATGACCGATGAAGCGAGCATGCAAGAAATATTTTCAGTATATCTTGAAAGTCGGTCCCGAATATCGTTCATCGAACTGTGTATTGAGTTCGAGCAATCTGCAGCGGACCGAGATATTGAATTGGAAGATTACAACAGTGATAGTGAGGAAGAGTTTGAAAGTAACTACGAGGTTGTTAATCCGGGTGTAGATGAAGATCAAGCTGACGATGCTATGGTGGCAGATGTGGCGGATGTGGCAAATGCACTAGCAAACCAGCTGCCATTTGAGGAGCCGACTTTCATGCGGTCCTTGGATTTGGAGGCCATGCATGCACCGGAGTTTCCTCAATATAATTATTTATCGAAATATAAAATTTGTGCCGTGATTGTAGCAGAGCTTCTTGTTATGATGGATGGTGAATTTACCGTGGAAATGGAATTCAGTTCTAGGGAGGCAGTAATTAAGGTGATGAAAGATTATACCATCCGTAGAGGTGTAGATTATCGGGTCAAAATGTCTAGGAAGTACTGCTGGGAGATAAGGAGGTACAATGGTAGTCACACCTATACTAGGGATACCATTTCTCAAGATCATTCGAAGTTGGATTCCAACACAATTGCAGAAGCAATAAAGCCATTGGTAGAAGTTGACCCATCTATAAAGGTGAAATCAGTGATTGTGGAAGTACAGTCGAAGTTTAACTACACCATAAGTTATCGCAAAGCATGGTTGGCAAAACAGAAGGTAGTGAAGTCAACTTTTGGAGGTTGGAAAGCTCTGTATGAAGCTTTGCCGATATGGTTTGAGGCCATGTGTCACAAGGAGCCATCCGCGGTTGTTCATTTTGAAAGAATCCCTGCATATCAGGGAGATGACTTGGTTCTTCATATTCGTATTATGGATGATTCAAGCTCAGATTGTCAGCTGAATCAGGGCGAAGTGGATTATGAATTTGAATCTAACGAAGTTCCTGAGCCTCTCTTTGTTGTTGATGACCAGTTTGTTCCGAAGGTTGGAATGACCTTTACCACCCTTGAAGATGCTGGAAAATTTTACAGAAACTACACCAAGGCTGCAGGTTTTTCTACAAGAGTTCGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATGTAGCAGAGAGGGAAAATGGAAATCTAAAATATCTCCGATCGAGAAAACCAATCCGACAGCCGGTTTAAACTGTCCTGCAAGAATTTATATACACACATTGAAGGATGTCGGTGCTTGGATCATTTCAAAGGTTGTGCTGGATCATTCACACCCCTGCTGTCCAAGTAAAGCAGAGATGCTCAAACAGCACAGGGAACTAAGCATGTCCATTTGTCGTACAATAGAGAATAACGAGGAGGCCGGTATCAGACCAAGCAAAACCTACCAATCATTTGTCGCGGCTGCCGGGGGTCACCGCAAACCGTCATATATGGTTCCTATCTATCTGGATCACAACTTCTGGGCAGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTTAACAAGTTTATCACCCGGAACAGCTCGCTTATTCAGTTTGTCAAACAATACGATAATTGCCTCGGAAGCCGGGAGCAAGCAGAAAGAGAATCAGATGCTGCAGATTTTCATATGGTCATACCGTGTGCAACCAAATCCTCCATTGAAGCTCAGTTTCAAGATGTGTACACTCATCAAAAGTTTAGGGAATTCCAAGCGCAATTCAGAGGAAAGGCGAATTGCATCACCAGATTAACGAATTCCGCTCTAGGCTATTCAGTATACGAAGTCGGAGAACAAGTTTCCAGCTCAATATTCAACAAGTTTGTGGTTACTTACGACTCAGTTGCAGCCGAGGAGCTGACTGCAATTCTGCACCGTGCGTACGATAACGTCATGGCTGAGATGGAATCATTAAAAGCCAAAAGGAAGGGGACATCTTCTTTATCCCACGAAGACGCCAACTTGGAATCCGTTAACGAGCTTCAAAGCCCGCCAAGGATTCGAACAAGAGGACGTCCAAAAAATAGGTTAGGTTCAAAGTTGGACAAACAGATCGCAAATGCCACAAAGAAGAAGAAAACGAAAGTTTTAAGCGAGATAAACTTGTTTGATGCCGCATCAGTGGTGCATTCAAATTCCAGCCAATATCAAGGACATGTTATGAATTATCAGTTCAGGGTACCAGGAGCAGGGGATAACTCTTTGGCTGTATAG 2307 0.4257 MNSQISRRVLYILYRYPISVFGGLVQFQTKYMTDEASMQEIFSVYLESRSRISFIELCIEFEQSAADRDIELEDYNSDSEEEFESNYEVVNPGVDEDQADDAMVADVADVANALANQLPFEEPTFMRSLDLEAMHAPEFPQYNYLSKYKICAVIVAELLVMMDGEFTVEMEFSSREAVIKVMKDYTIRRGVDYRVKMSRKYCWEIRRYNGSHTYTRDTISQDHSKLDSNTIAEAIKPLVEVDPSIKVKSVIVEVQSKFNYTISYRKAWLAKQKVVKSTFGGWKALYEALPIWFEAMCHKEPSAVVHFERIPAYQGDDLVLHIRIMDDSSSDCQLNQGEVDYEFESNEVPEPLFVVDDQFVPKVGMTFTTLEDAGKFYRNYTKAAGFSTRVRSTNRKGNEIKNQLITCSREGKWKSKISPIEKTNPTAGLNCPARIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMLKQHRELSMSICRTIENNEEAGIRPSKTYQSFVAAAGGHRKPSYMVPIYLDHNFWAGMRSTQRSESMHSFFNKFITRNSSLIQFVKQYDNCLGSREQAERESDAADFHMVIPCATKSSIEAQFQDVYTHQKFREFQAQFRGKANCITRLTNSALGYSVYEVGEQVSSSIFNKFVVTYDSVAAEELTAILHRAYDNVMAEMESLKAKRKGTSSLSHEDANLESVNELQSPPRIRTRGRPKNRLGSKLDKQIANATKKKKTKVLSEINLFDAASVVHSNSSQYQGHVMNYQFRVPGAGDNSLAV* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1374 768 Pfam FAR1 DNA-binding domain 375 460 IPR004330 -
Amo17g1374 768 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 510 644 IPR031052 GO:0006355
Amo17g1374 768 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 346 472 IPR031052 GO:0006355
Amo17g1374 768 PANTHER OS03G0843700 PROTEIN 346 472 - -
Amo17g1374 768 PANTHER OS03G0843700 PROTEIN 510 644 - -
Amo17g1374 768 MobiDBLite consensus disorder prediction 681 695 - -
Amo17g1374 768 MobiDBLite consensus disorder prediction 673 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1374 Amo-Chr17 43609358 43618636 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g1374 FAR1 1.1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1374 - - ahf:112727995 477.248