Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1361 ATGGATGGTCATACACAAAAATGGTTGGAAAAAGCGAAGCCATTCATAGGTGTGATTTTCTTGCAGTTTGGATTTGCCGGCATGGATGTTCTATCCAAGGCTGCACTCAACAAGGGAATGAGCAATTATGTTCTTGTTGTTTATCGCCATGTTGTTGCCTTCATTGTCATAACCCCTTTCGCATTAGTCATTGACAAGAAAGTGAGGCCAAAGATGACATTTTCAATCTTTATGAAGATGGTGGCACTAAGCATACTAGAGCCAGTTATTGATCAGAATTTATACTTTTTGGGAATGAAATACACAACAGCAACCTTTGCCGCTGCCATGACCAATATGCTTCCTGCCATTACCTTTGTCTTGGCCTGCATTCTTAGGCTTGAGAAGGTGAAAATAAGAAGTGTACGGAGTCAAGCAAAGGTGGTTGGGACTCTAGCAACTGTTGCAGGTGCCATGGTTATGACACTGCTTAAAGGCCCAGAGCTCTTCGGGGCCCATGGAAGCAATACCCATACCCAGCATAATAATGGGGTAAACCTTCATGATGTCATTAAGGGTTCCATCATGATCACTGTTGGCTGCTTTAGTTGGGCTTGTTTCATGGTTCTTCAATCTGTTACACTAGAAGCGTACCCTGCTGAGCTGTCACTTACATCATGGATATGCCTATTGGGAACAATTGAAGGTGGCTTAGTGGGCCTCATTATGGAAAGGGCTAATCCTTCTGTATGGACTCTACATTGGGATACAAAACTACTTGCTGCTGCCTACAGTGGCATATTTTGCTCTGGACTAGCCTATTACATTCAAGGAGTAGTCATGAAAACTAGAGGTCCAGTCTTTGTAACAGCATTTAGTCCTCTCTGTATGGTCATTGTTGCTATCATGGGCTCCATTTTTCTCGCTGAGCAAATGTTCCTTGGAAGGGTGGTTGGTGCCATTGTGATTATTTTGGGGCTGTACATGGTGGTTTGGGGCAAAAGCAAAGACTATGACTCACCAAATCCAAGTATTGAAGATAACAGTAATGCCAAAAATCAGTATCTTACTCAAGAAGGCATGAATGGTAAGGAAAACATAGCTAGAGATGAACAAGTATGA 1101 0.426 MDGHTQKWLEKAKPFIGVIFLQFGFAGMDVLSKAALNKGMSNYVLVVYRHVVAFIVITPFALVIDKKVRPKMTFSIFMKMVALSILEPVIDQNLYFLGMKYTTATFAAAMTNMLPAITFVLACILRLEKVKIRSVRSQAKVVGTLATVAGAMVMTLLKGPELFGAHGSNTHTQHNNGVNLHDVIKGSIMITVGCFSWACFMVLQSVTLEAYPAELSLTSWICLLGTIEGGLVGLIMERANPSVWTLHWDTKLLAAAYSGIFCSGLAYYIQGVVMKTRGPVFVTAFSPLCMVIVAIMGSIFLAEQMFLGRVVGAIVIILGLYMVVWGKSKDYDSPNPSIEDNSNAKNQYLTQEGMNGKENIARDEQV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1361 366 PANTHER WAT1-RELATED PROTEIN 9 344 - -
Amo17g1361 366 PANTHER WAT1-RELATED PROTEIN 9 344 IPR030184 GO:0016021|GO:0022857
Amo17g1361 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 329 - -
Amo17g1361 366 Pfam EamA-like transporter family 185 324 IPR000620 GO:0016020|GO:0016021
Amo17g1361 366 Pfam EamA-like transporter family 17 154 IPR000620 GO:0016020|GO:0016021
Amo17g1361 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1361 Amo-Chr17 43028433 43032278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1361 9 363 Nodulin-like Gene Family AT2G37460 64.426 1.57e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1361 - - gmx:100777050 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g0634 08 11270316 11276078 Amo17g1361 17 43028433 43032278 hybridization