Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1356 ATGGAGAGAGAGGATGAAGATACGACGCAAGAGAGGAGGCTGTTCCGCCATGCACTGTCGTCGCTCCTGGGGTCGATTGAAGCCGCCGCCGCAGCTAGGGCTTGTCGTGCTCCTGTCCGGAACAATGCTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAAGCGTGGCAAGGGGATTGCAGTACCTTCATGAGAATTCACATCTAAGAATTGTTCACCGAGACATCAAAGCAAGTAACATTCTTCTTGATCATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTGTAA 357 0.4846 MEREDEDTTQERRLFRHALSSLLGSIEAAAAARACRAPVRNNADRFLNWSTRFQIVLSVARGLQYLHENSHLRIVHRDIKASNILLDHKFHPKIGDFGLARFFPEDQAYLSTQFAGTL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1356 118 Pfam Protein kinase domain 54 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1356 118 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1356 118 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 42 118 - -
Amo17g1356 118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 74 86 IPR008271 GO:0004672|GO:0006468
Amo17g1356 118 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 42 118 - -
Amo17g1356 118 SUPERFAMILY Protein kinase-like (PK-like) 44 117 IPR011009 -
Amo17g1356 118 Gene3D Transferase(Phosphotransferase) domain 1 34 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1356 Amo-Chr17 42752116 42752808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1356 47 118 Receptor kinase-like Gene Family AT1G70530 63.889 4.14e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo17g1356 Pkinase 2.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1356 - - ahf:112703114 161.384