Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1349 TTTACATATGATCGCGAAGAAGCTGTTGCAGGTGGAAGGGGTTTACCATCCCCATTTCTCAGCCGACTACGAATCACGTGCGGGTGTTTAATTAAGATTGTCTCCCTCCAGAAGTTCAGTTCTTTACTCATTGGATTTCAAGCTTCGGTTGTCATCAAGCTTTATGTAGTTGGTAAAATTATGTCCAGAAACGAGGATGATGTGAAGAATGATTCTGATAATGATTTGTGTGATGATTTCAATTATCAACCGAATGCAGAAGATGATGCTGAAGACGACGATGTGGATTCACTGGATTCTACTAGCAAGACTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGAATTTAGGACAGAGGATGAGGCTTGCCAATTTTATAATGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTAGTTAGGGATAATCAAGGTAGAATCATTAGCAGGAAACTTGTTTACAATAAGGAGGGCTGGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACTAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTAACATGTTTTGTTGAATCTCACAACCACGATCTGACGCCACCCCAATTTGCACATCTG 693 0.4199 FTYDREEAVAGGRGLPSPFLSRLRITCGCLIKIVSLQKFSSLLIGFQASVVIKLYVVGKIMSRNEDDVKNDSDNDLCDDFNYQPNAEDDAEDDDVDSLDSTSKTEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRKLVYNKEGWRNMRYLDLDDRSREARSLTRTKCPARLRVKLDYGCGRWKVTCFVESHNHDLTPPQFAHL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1349 231 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 61 226 - -
Amo17g1349 231 Pfam FAR1 DNA-binding domain 134 224 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1349 Amo-Chr17 42655199 42656206 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g1349 FAR1 3.6e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1349 - - adu:107460934 330.102