Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1317 TATGATCATTGCAGAAGAGGATGCTCAATCGACTGCAAACACTATTTGGTTGGAACATACATTTTGTTGATTCCACAGAGTCAATATCAAGTCACTTTTTGTTTAGGCAAATCAGAGGATGTATGGACTTACCAAGTGGTTGAGTCCGCTACAAAGGTAGTTGGTTCCTTCTTGTGTGAGAATGGAAGCTTGTCATCCACTTGTGGCATGGACCTCTGGACTCAATACATATGCAAGGCCTGTGGAGACAGGGTGCTAAGAGGATTACATGAATGGGAACAACACAAAAAGAGTCGTGGTCACAGGAAACGTATTTCTAGTCTTAAGAGCAAGGCACAAAGTATTGGTACCTTGGACAAAATGTTTGATTACTATGAATGCAAC 384 0.4141 YDHCRRGCSIDCKHYLVGTYILLIPQSQYQVTFCLGKSEDVWTYQVVESATKVVGSFLCENGSLSSTCGMDLWTQYICKACGDRVLRGLHEWEQHKKSRGHRKRISSLKSKAQSIGTLDKMFDYYECN 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1317 128 Gene3D Classic Zinc Finger 71 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1317 Amo-Chr17 40557604 40559724 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1317 33 110 C2H2 Transcription Factor Family AT2G27760 45.238 1.28e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1317 K00791 - gmx:100792690 123.25