Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1316 ATGCTTGAAGTTATGGTGTCTAGCAGCCAACAAAGTATTTTACAATCAACAAAGTTATTGTTTCCTTCCTTCTTTTACACATCATACATGGCATTTGTGATAGACTTGAACACGCAGCTGTCATCAAAAGAAATCGACTCATTTGATGTCCATATTGATATGGACGATACAAATATTTGTGTCATAATTCATCCCACCATTTCTGACGAGGAGATTCCAAAAGTGGGGATGCTATTTGGAACCCTCGAAGAAGCACGCCAATTTTACTACAACTATGCCAATAAAGTGGGATTCGAGCCTCATATAAGAAACACTAACTTCGACAAGAATCGAAGGACACCTATTAACCAATCCATACAGTGCAATAGAGATGGATACCGAACAAAGAAGAATCCGGTAGAATTAGCTCACACGCACCGGTGTGATCCCAGTTTGTCATGGATATTTAAGAAAAATAGGAAACTCTCTGTGCACGTTAAGGATGTCATTGAGCGCAACGACCAGGCTGATAAGGAACAACAGGAGTTGGAATGTGATGCAACAGACAACAGGGGCCTGATCCCATGTGTATCGAACTCTCCTATTGGGAAGCAGTTCCAATATGAGTACACCAACTTCATATTTCGTGATGTTCAAGCCGAATTTATCAAAAAGTGCGACTGCAACCTGTCTCCAAGGGTAGTGAAGAACAACCAATACTTCTATGAAGTGACTCAACAGAAGATAGTAAAGGGGATGTCTGTTTATAGCGAGTATGAAGTTGTGTTTTGTCCTATTTCGCACCAGGTTAGGGTTGACAAGGCCTATATACTATCTCGGTGGAGCAAGAATGTTTATCGCAAGCACACCCACATTAGAAGTAGTCACGACTCACGACGTTCTTATGAAAGCATGAATATATTTAGGAGACTGTGTGTTGACTTCTACAATGGGGCCCATGACTTTGTGCATGACAAGGAGGAGGCTGATATATTGCGTTCCGCTTTTGCGAGTGCTAAAGTGGAACTTAGCGAACATCGGGCAAAACATTCAGAAAGCGTACGCACAAGGGGGCGTCCAAGCTTCAAGAGACTCGAGGCGGATATGGACCGGAAAATTAAGAAGGCTACTAAGAAACGTCGAGCTAGTAGTAAACATCCAAAGATTATTGCAGCTATTGAAGGAGACAAACATTTAAACAAGGCCACCAAGAGATGCATTACTGCTAGCAAACACCCTAAGGTTTATTTTAGTGTTTATTGCTGGAGAATGTGTTATAAGTTTTGTATTCTGTAA 1275 0.4141 MLEVMVSSSQQSILQSTKLLFPSFFYTSYMAFVIDLNTQLSSKEIDSFDVHIDMDDTNICVIIHPTISDEEIPKVGMLFGTLEEARQFYYNYANKVGFEPHIRNTNFDKNRRTPINQSIQCNRDGYRTKKNPVELAHTHRCDPSLSWIFKKNRKLSVHVKDVIERNDQADKEQQELECDATDNRGLIPCVSNSPIGKQFQYEYTNFIFRDVQAEFIKKCDCNLSPRVVKNNQYFYEVTQQKIVKGMSVYSEYEVVFCPISHQVRVDKAYILSRWSKNVYRKHTHIRSSHDSRRSYESMNIFRRLCVDFYNGAHDFVHDKEEADILRSAFASAKVELSEHRAKHSESVRTRGRPSFKRLEADMDRKIKKATKKRRASSKHPKIIAAIEGDKHLNKATKRCITASKHPKVYFSVYCWRMCYKFCIL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1316 424 Coils Coil 159 179 - -
Amo17g1316 424 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 48 147 IPR031052 GO:0006355
Amo17g1316 424 PANTHER OS03G0843700 PROTEIN 48 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1316 Amo-Chr17 40505848 40511421 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo17g1316 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1316 - - ahf:112774709 395.201