Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1315 ATGCCTCAGACGATGCCGCAACCTGCTTCCGCCGCCGTCGCGCAATTAGCTTATGCTGCCACTGTGAACCGGAGTGCCAAAAATCTGTATGGTTATGCTAAGGAGGAAGCTCTTGGGCAGGATGGGATTAAGCTAATTGTTGACCCCATAGATTTTGCTTTGGCTGATGATATTGTGAACCGTGTCGTAATGGGAGAGAGCTGGACTGGGCAAAACAAGATGGGAGAGCAGTTCTTAGCGGTAGCGACGAATACTCCTTTCTATGATGATGATGGAAGTTCAGGCTCTAGGCCTCTTAGAAGTAGCATTTCAAATAAACTTGGCCTTGATACTCAACAGCCTCTCCAAACTTCTATAGCATCCAAGTTCTCGATTTTGGTAAGTAACAAAATTAAGTCAAGAATCCGGACAGGAAAAAATAACGGTGATCGTGAAAGCGGGAGCAGAGGAAGCCATCAATCTGAGCATTTTAGTTTCTCAGAAGTTGGTGTTGCAGACCACAGAGAGGATGCTAATTCCAGTGGAGCTAGCACACCCAGAGCATATGAACTTTCTAAGAAGAAGGGCAAAGTTGGCACGCCAGAAAGACCCCTTTCAGATCTTGGACTGCTAAGCTACAGAGGATATTGGACCAGAGTTCTTTTGGACATTCTGAAAAAGTGTAATGGTAACATTTCCATCAAGGAGCTAAGTGATATGACTGCCATCAAAACCGAAGATATATTGACAACTCTTCAGAGCCTAGAATTAATCCAATACAAAAAAGGACAACATCTTATTTGTGCAGATTCTAAGGTTCTTGATCGCCATCTTAAAGTTGCTAGTAGAGGAGGTCTTGAGGTTAATGTTAGCAAATTGATCTGGACCCCTTGCAAGGAACAAAATTGA 888 0.4358 MPQTMPQPASAAVAQLAYAATVNRSAKNLYGYAKEEALGQDGIKLIVDPIDFALADDIVNRVVMGESWTGQNKMGEQFLAVATNTPFYDDDGSSGSRPLRSSISNKLGLDTQQPLQTSIASKFSILVSNKIKSRIRTGKNNGDRESGSRGSHQSEHFSFSEVGVADHREDANSSGASTPRAYELSKKKGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKCNGNISIKELSDMTAIKTEDILTTLQSLELIQYKKGQHLICADSKVLDRHLKVASRGGLEVNVSKLIWTPCKEQN* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1315 295 Gene3D PAS domain 19 96 - -
Amo17g1315 295 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 181 294 - -
Amo17g1315 295 SUPERFAMILY PYP-like sensor domain (PAS domain) 21 94 IPR035965 -
Amo17g1315 295 Pfam MOZ/SAS family 181 257 IPR002717 GO:0004402|GO:0006355|GO:0016573
Amo17g1315 295 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 181 290 IPR016181 -
Amo17g1315 295 ProSiteProfiles PAS repeat profile. 22 66 IPR000014 -
Amo17g1315 295 PANTHER HISTONE ACETYLTRANSFERASE 181 294 - -
Amo17g1315 295 MobiDBLite consensus disorder prediction 136 195 - -
Amo17g1315 295 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 1 290 IPR002717 GO:0004402|GO:0006355|GO:0016573
Amo17g1315 295 Gene3D - 198 269 IPR036388 -
Amo17g1315 295 MobiDBLite consensus disorder prediction 136 151 - -
Amo17g1315 295 CDD PAS 22 93 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1315 Amo-Chr17 40472241 40474281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1315 181 295 C2H2 Transcription Factor Family AT5G64610 84.348 7.95e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1315 K11308 - ahf:112729971 205.682