Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1297 TATGTCGCCGTCGTAGGAAACTCCCTCGCTGTCGTGTGGAAGCTCTGTGGCCGTCGCCTTCTCCTCTGTTCGAGCGGTCTCTCTGTGTTCGTTGGTGCCGCCGTTTCCTCTGTTGTTGCCGTCACTCCCCTTCCTCCTCGCCGCCGCTATTTCATTGAGTGGGCAAAGATAGAAGCTGCAAGAGGAAGGGTCATATATTGGCAAGGGTACCGAGTTCTTAGCATTTTGGCAATGTCAAGATCCATAGATATGTATCTGCCTTTGGCATCTCTACAGCATATTTATGTCAATGTAGTTGGATTTGAAGTGATGCTAGTTACTGTAAACTTTTTCTTGATAAGGGTTATGGTTTCTAGTGATAGGTACTTGAAACCATGTATTATTCCAGAACCGGAAGTGAAGTTTGTACAATGGGAGAAACATGACGAGTGCCTTTTTCTAGCTAGTAATGGTTTATGGGATGTGGTGACAAATGATGAAGCCCGTGAAGTTGCACGGAAGAGGATCCTTCTTTGGCACAAGAAGTATGGCGAGACTGCGTCAATGACCGAACAAGTTGAAGAAGCAGTTGACCCTGCAGCTCACGCTGCTACAGAGTATCTCTCTAGACTTGCCCTCCAAAGGGGAAGCAAAGATAACATCTTTGTAATTGTGATAGACTTGAAGGCTTAA 672 0.4598 YVAVVGNSLAVVWKLCGRRLLLCSSGLSVFVGAAVSSVVAVTPLPPRRRYFIEWAKIEAARGRVIYWQGYRVLSILAMSRSIDMYLPLASLQHIYVNVVGFEVMLVTVNFFLIRVMVSSDRYLKPCIIPEPEVKFVQWEKHDECLFLASNGLWDVVTNDEAREVARKRILLWHKKYGETASMTEQVEEAVDPAAHAATEYLSRLALQRGSKDNIFVIVIDLKA* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1297 223 ProSiteProfiles PPM-type phosphatase domain profile. 1 221 IPR001932 -
Amo17g1297 223 SUPERFAMILY PP2C-like 51 222 IPR036457 -
Amo17g1297 223 PANTHER ALPHABET, ISOFORM E-RELATED 53 86 - -
Amo17g1297 223 PANTHER ALPHABET, ISOFORM E-RELATED 119 223 - -
Amo17g1297 223 Gene3D - 1 223 IPR036457 -
Amo17g1297 223 CDD PP2Cc 1 221 IPR001932 -
Amo17g1297 223 Pfam Protein phosphatase 2C 53 214 IPR001932 -
Amo17g1297 223 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 53 86 - -
Amo17g1297 223 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 119 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1297 Amo-Chr17 39143859 39149033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1297 23 222 PP2C-type Phosphatase Gene Family AT4G26080 44.118 1.57e-45 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1297 K14497 - aip:107607045 350.132