Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1293 ATGCATGGACATTGGAACAAGTGCAAATTGGACCCAGCAGCATGCACACCACTCCAAATCGCCATATTTCAAGATTTTAGGCTCGACATGCTTGCAACTTTGAGACCTTTCGCAATCTATTTGGGAAGAGGAGGAATGTTCATAAACTCATGTTTTGCTCACTGCCAAAGTGAATCACAAGATACGTGGTTTGAAGATGATTCCCCAAGAATAAACAAGACAATTGCAGAAGCAGTTGGTGATTGGTATTTTAGCAGAAAAAGAAGCAAGGAAATAGACTATCCATACCCATGTGACACAACTTGTCACAATCTTATACCATATCCTCGTGGTAATATCTGTTTCTTAAAAATTTTATACACTAGTTGCTTTGGATATCGCGAAGACTTGAGGTCCATTTATTTAATAAAAAATTTGGAATGTTGCAAGCCAATAGAAGATTAA 444 0.3761 MHGHWNKCKLDPAACTPLQIAIFQDFRLDMLATLRPFAIYLGRGGMFINSCFAHCQSESQDTWFEDDSPRINKTIAEAVGDWYFSRKRSKEIDYPYPCDTTCHNLIPYPRGNICFLKILYTSCFGYREDLRSIYLIKNLECCKPIED* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1293 147 Pfam Pectinacetylesterase 2 87 IPR004963 GO:0016787
Amo17g1293 147 PANTHER NOTUM-RELATED 2 107 IPR004963 GO:0016787
Amo17g1293 147 PANTHER PECTIN ACETYLESTERASE 9 2 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1293 Amo-Chr17 38695788 38696586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1293 3 107 Carbohydrate Esterase AT5G23870 61.682 3.76e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1293 K19882 - aip:110265116 247.669