Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1289 ATGGGAGAAGACTGCGGAACATGGATGCCGCAGCTGCATTTTGATTGGCAGTCACCCAATTTGAATTCTTATGCGGGGAAGCAAAATGGCATATCTGCTGCCGTGAACTCAGGCATCAATAACATGGCCACGAGGAATGAGACAATGCCAACATATGCATCCTCTGCACTACCGCATTTGCAGTTAGGACATTCCAATGCACCACCTCATGGTTGGTTTTATTGTTTGCCTCGCTTCCGACAGAGTTTTACACCTAACCCTGTCCCAAACTTAAATGCCGAAGAAAAACTCCATTCGGGCTGTGTCAAAACTTTCAGGGAGGAAACTAAACCTGACGGTGAATCTGGTTTCCATCAGAAGCAATTCCTGGTCATCGACCAATCAGGTGACAAAACAACCCTTATTTATAGCTCACGGCTTGGGAGTCCTGTCGAGTGCCTTGCTTCTTGGAATTCAAAACTGCATGGTTCTAATAACTTGAACAATGTGAATGAGCCGCCTTTTGGAAGAGATTTGAACCATGTGGTTGGACCAACTTTAGACGGTAAAGTTGATGATGAAAATCGGGGAATGGACACTGAAAGTGAGATGCATGAAGATACAGAAGAAATCAATGCACTACTTTACTCCGATAGCGAGGGTTACTCCACTGAGGATGATGAAGTTACTAGCACTGGCCATTCACCGAGTACAATGACCAGTCATCATAACCAGGAACCAATTAGGGAAACTGCAGAAGAAGTTGCTAGTTCTGCTGGAAAAACAAAGAAGCGGAAGCTGTACGAAGAAAATCATGCGGATGAGCAAGTTATGGATACAGCAAGTTCTCTGAATGTGAACAGACCCTTAAACTTGGGAGACGATGCAGAATCAAGATGCTCCTGTGGCAGCAACAGTCAAGGGTTAAATGACGAAATAAGGTCCTTGTTAGGCAACAAGAAGATGAGGAAGGAGAAGATACAAGAGGTTCTGAGCATTCTGCAGTGCATAATTCCCAGTGGGAAGGACAAGGAACTTGTCGAGCTTCTTGACGAAGCCATAGGATCCTTGAAATCCTTGAAGATGAAGGCCAGAGCTCTCGGACTCGATGCCTAA 1095 0.4511 MGEDCGTWMPQLHFDWQSPNLNSYAGKQNGISAAVNSGINNMATRNETMPTYASSALPHLQLGHSNAPPHGWFYCLPRFRQSFTPNPVPNLNAEEKLHSGCVKTFREETKPDGESGFHQKQFLVIDQSGDKTTLIYSSRLGSPVECLASWNSKLHGSNNLNNVNEPPFGRDLNHVVGPTLDGKVDDENRGMDTESEMHEDTEEINALLYSDSEGYSTEDDEVTSTGHSPSTMTSHHNQEPIRETAEEVASSAGKTKKRKLYEENHADEQVMDTASSLNVNRPLNLGDDAESRCSCGSNSQGLNDEIRSLLGNKKMRKEKIQEVLSILQCIIPSGKDKELVELLDEAIGSLKSLKMKARALGLDA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1289 364 MobiDBLite consensus disorder prediction 215 271 - -
Amo17g1289 364 PANTHER TRANSCRIPTION FACTOR BHLH145 1 363 - -
Amo17g1289 364 MobiDBLite consensus disorder prediction 219 238 - -
Amo17g1289 364 PANTHER TRANSCRIPTION FACTOR BHLH145 1 363 IPR037546 -
Amo17g1289 364 MobiDBLite consensus disorder prediction 239 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1289 Amo-Chr17 38545186 38546280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1289 1 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 30.411 3.94e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1289 - - gmx:100812109 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g1289 17 38545186 38546280 Amo17g1289 17 38545186 38546280 ECH