Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1281 ATGAACCTCTCTCTTTCTCACTCTATTTCTCTCTCTATATATATAGATATAGAAACCGTACACAGTTCATCAACATCTATCTGGTCGAGCTGGAGAGTACTAACATACACCACGCATCAGAATCCTCTCCTGTCCATTAAGTTGATCTTCAATTCGTTCTATCTGTTGTTGAATCATCGAAAGATGAACAAAGGTTTTGGAAAGAATTGGTTGACAGTAGGTGTATTATTATTTCTGTGGTCAATTCTGGTGATTCCAAGCTCAGTTGTGGGGGAGTGCACATGCGAAGAGGAAGAGGAGAATGAAGGTGGTGAAGAAGCAGCAGTGGCTCTGAAATACAAAATAACAGCTTTGGGTACGATTCTGGTGGCAGGTGCAATCGGTGTAACCATTCCAACGCTGGGGAAGATCAAAAGGTTCTCTGCCTTGAGTCCAGAGAGGGATTTCTTCTTCTTGGTAAAGGCGTTCTCAGGAGGGGTAATATTGTCCACTGCTTTTATACACGTCTTGCCCGATGCTTTTGAGAAGCTAACATCTCCCTGCCTCAAGGAACATCCGTGGGCAGATTTTCCTTTCACGGGATTCGTGGCCATGTTATCTGCAATTGCTACGCTCATGGTTGATTCTCTTGCTACTGCGTATTTTGGTCACACTGGCAATGGCAACATCTCCCAAGACAAGATAGAGGAGGGAGTAGATCACGTGCATCTTCATACACATGGAACTCATGGTCATTCTCATGGTTCCACTTCTTCGTCAGACTCCACACAACTCCTTCGTCATCGTATTATTTCTCAGGTGTTAGAGCTAGGAATTGTGGTTCATTCTGTGATAATTGGGATCTCGTTGGGAGCAAGTGAGAGTCCAAAGACCATAAAGCCTCTAATTGCTGCCTTAACTTTCCATCAATTCTTTGAAGGCATGGGCCTTGGTGGCTGCATCTCGCAGGCAAAATTCAATAGAAGAGCAGTTGTAACAATGGCAGTGTTCTTTACATTGACAACACCAGTTGGAATAGCGATTGGGATAGGGATTAGCAACGCATACAAGGAGAACAGCCCAAGAGCACTGATTGTGGAAGGGGTCATGAACGCGACATCTTCCGGGATATTAATTTACATGTCTCTCGTGGACCTGCTCGCAGCAGATTTCATCAACTCAAGAGTCCAACAAAGTGGCCGGCTTCAGTTTGGAGCTTATACTTCTCTTCTACTTGGAGCTGCTTGCATGTCTATTCTAGCTAAATGGGCTTAA 1254 0.4442 MNLSLSHSISLSIYIDIETVHSSSTSIWSSWRVLTYTTHQNPLLSIKLIFNSFYLLLNHRKMNKGFGKNWLTVGVLLFLWSILVIPSSVVGECTCEEEEENEGGEEAAVALKYKITALGTILVAGAIGVTIPTLGKIKRFSALSPERDFFFLVKAFSGGVILSTAFIHVLPDAFEKLTSPCLKEHPWADFPFTGFVAMLSAIATLMVDSLATAYFGHTGNGNISQDKIEEGVDHVHLHTHGTHGHSHGSTSSSDSTQLLRHRIISQVLELGIVVHSVIIGISLGASESPKTIKPLIAALTFHQFFEGMGLGGCISQAKFNRRAVVTMAVFFTLTTPVGIAIGIGISNAYKENSPRALIVEGVMNATSSGILIYMSLVDLLAADFINSRVQQSGRLQFGAYTSLLLGAACMSILAKWA* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1281 417 PANTHER ZINC/IRON TRANSPORTER 83 417 - -
Amo17g1281 417 Pfam ZIP Zinc transporter 112 414 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo17g1281 417 TIGRFAM zip: ZIP zinc/iron transport family 95 417 IPR004698 GO:0005385|GO:0016021|GO:0071577
Amo17g1281 417 PANTHER ZINC TRANSPORTER 1 83 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1281 Amo-Chr17 37892053 37895407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1281 92 417 Inorganic Solute Cotransporters AT3G12750 55.357 1.13e-124 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1281 K14709 - sspl:121746231 399.438