Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1273 ATGGGTTGCTGCCAGTCATCGTTGATGCTGAGAGTGAGAGAGGGAGGAGACACTCACCCTCACCCTGACAAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGAGAAGGAGAAGGAAAACCACAAGGATCAGGCCCCCTACCTCCGCAACCACCAGAAGGAGTCCCTCGCAGTCGCAGTCCCAGCCACAGTGGCACCCGCTGCTCCTGACKGCTGGTGGCTCTCCTTCTCGGAGTTRTCGCTGGCGGAGCTGAAGGCCGCCACCGACAATTTCAGCTCCGAATTCATAGTGTCGGAGAGCGGGGACAAGCCCCCTAACCTCGTTTACAAGGGGCGCCTCCGCGACCACTGGATTGCCTTCGTGGAAGAGGCCTCCGGCGTCGGCAACCTCCGGCACCCCCGCCTGGCCAATCTCATCGGCTACTGCTGCGACGCTGACCACCGCCTTCTCGTGGCCCAGTACATGCCCAACGACACCCTGGCAAAGCACCTCTTCCACTGGGAGAATCAYACGATTGAGTGGGCCATGCGCTTGAGAGTCGCCCATTATATCGCCCAAGCTTTGAATTATTGCAGCTCCGAGGGCCGCCCCTTGTACCATGATTTGAATGCTTACCGTGTTCTTTTCGACGAGGAAGGTGATCCCCGTCTCTCCTGTTTTGGTTTGATCAAGAACAGCAGGGATGGAAAAAGTTATAGCACAAATCTTGCTTACACTCCTCCTGAATATTTAAGAAATGGAAGGGTCACCCCTGAAAGTGTCATTTACAGCTTTGGGACCGTTCTTCTAGATCTGCTTAGCGGCAAGCACATCCCTCCAAGTCAYGCACTAGATATGATACAGGGTAAAAACAACATGCTTTTGATGGATTCACATTTGGAGGGGAAGTTTTCTATAGAAGAGGCAAATGTAGTTGTTAATCTTGCCTCTAAATGTTTGCAATATGAACCTAGGGAGCGACCTGATACAAAGGATTTGGTTACAACACTTGCTCCACTGCATACAAAACCTGATGTTCATTCTCACATTATGCTTGGCATTCCAAAACAAGAGGAAGCTCCATCAACCCCACAACGGCCTCTTTCTGCAATGGGAGAAGCTTGTTCTAGAATGGARCTAACTGCAATCCATCAGATCTTGGTTGCGACACACTACAGAGACGATGAGGGAACCAATGAGTTGTCATTCCAAGAGTGGACCCAACAGATGAGAGACATGCTGGAGGCAAGGAAGCGTGGAGACTGTGCATTTCGTGACAAGGATTTTAAAACAGCCATTGATAACTATTCCCAGTTTATTGATGTGGGAACGATGGTCTCCCCAACTGTATTTGCACGGCGCAGTCTGTGCTATCTTTTATGTGATCAGCCAGACCCTGCACTCCGAGATGCAATGCAAGCACAGTGCGTTTATCCAGACTGGCCCACGGCTTTCTATATGCAATCMGTCGCCCTTGCAAAGTTGGACATGCAGAAGGATGCCACGGATATGCTAAATGAGGCTGCTGCATTGGAAGAGAAGAGGCAAAGGGGAGGGAGAGGATCCTAG 1545 0.5074 MGCCQSSLMLRVREGGDTHPHPDKKEKEKEKEKEKEKENHKDQAPYLRNHQKESLAVAVPATVAPAAPDXWWLSFSELSLAELKAATDNFSSEFIVSESGDKPPNLVYKGRLRDHWIAFVEEASGVGNLRHPRLANLIGYCCDADHRLLVAQYMPNDTLAKHLFHWENHTIEWAMRLRVAHYIAQALNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLIKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHALDMIQGKNNMLLMDSHLEGKFSIEEANVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVHSHIMLGIPKQEEAPSTPQRPLSAMGEACSRMELTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDCAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMQKDATDMLNEAAALEEKRQRGGRGS* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1273 514 ProSiteProfiles Protein kinase domain profile. 49 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo17g1273 514 Gene3D Transferase(Phosphotransferase) domain 1 155 346 - -
Amo17g1273 514 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 512 IPR045845 GO:0004672|GO:0009742
Amo17g1273 514 Pfam Protein tyrosine and serine/threonine kinase 115 329 IPR001245 GO:0004672|GO:0006468
Amo17g1273 514 Gene3D Tetratricopeptide repeat domain 403 511 IPR011990 GO:0005515
Amo17g1273 514 MobiDBLite consensus disorder prediction 14 44 - -
Amo17g1273 514 Gene3D Phosphorylase Kinase; domain 1 70 153 - -
Amo17g1273 514 Coils Coil 23 43 - -
Amo17g1273 514 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 512 - -
Amo17g1273 514 SUPERFAMILY Protein kinase-like (PK-like) 106 334 IPR011009 -
Amo17g1273 514 Coils Coil 486 506 - -
Amo17g1273 514 SUPERFAMILY TPR-like 406 507 IPR011990 GO:0005515
Amo17g1273 514 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1273 Amo-Chr17 37820277 37824799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1273 78 337 Glycoside Hydrolase AT3G07070 34.106 6.58e-38 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Amo17g1273 PK_Tyr_Ser-Thr 6.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1273 K14500 - gmx:100808907 851.662