Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1258 ATTCTTGCAAGGGCTAAAAATGGGACAGGCAAAACAGCTGCATTTTGCATTCCTGCATTGGAAAAAATTGACCAGGATAACAATGCTGATAAGCTTTTGTCCCTAGAATTCCAACCTTCTATAGTTTTTATTAATTTTGATTTTCCCAAGAATTCAAAAACTTATCTCCACAAGGTCGGTCGCTCAGGGAGGTTTGGGCATCTTGGTTTAGCAGTTACCTTGATCACTTATTGGGACCGCTTTAATTTGATTGAACAAGAATTTGGAATTGAAATAAAGCAAATTCCACCACACATTGACCAGGGACAGAGAATAGGTAAATCACAAAAATGCTTTACTATGTTTGGTATTTTTCGTGAAGTGTATTGTGGAGCTTTCCATTTGGTTCCTTTATCCGAGGAAGGCCTAGTATATGCTTGGGGTGATTCAATGACATTTCTTAATTCCCTTTCTAGAAATTCATTTTTGTTTATGTTTGTAAATTTCATGTACACTGTCGTTGCATGTATAGAGATGACATGGCTAATTTGGTTTGAATTCTATTAA 546 0.3608 ILARAKNGTGKTAAFCIPALEKIDQDNNADKLLSLEFQPSIVFINFDFPKNSKTYLHKVGRSGRFGHLGLAVTLITYWDRFNLIEQEFGIEIKQIPPHIDQGQRIGKSQKCFTMFGIFREVYCGAFHLVPLSEEGLVYAWGDSMTFLNSLSRNSFLFMFVNFMYTVVACIEMTWLIWFEFY* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1258 181 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 37 101 - -
Amo17g1258 181 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 1 31 - -
Amo17g1258 181 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6-RELATED 37 101 - -
Amo17g1258 181 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 6-RELATED 1 31 - -
Amo17g1258 181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 95 IPR027417 -
Amo17g1258 181 SUPERFAMILY RCC1/BLIP-II 118 144 IPR009091 -
Amo17g1258 181 Gene3D - 34 115 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1258 Amo-Chr17 37395450 37410421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1258 42 100 Eukaryotic Initiation Factors Gene Family AT5G11170 41.935 6.40e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1258 K12614 - ahf:114925348 183.726