Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1249 ATGGCTGCAAAATTTGAGGGTGGAGCATACCTCTCTTCCTTTGTTGATGCCGTTTTGAACAGGCTGTCTTCGGTCAACTCAACCCCAATAGCAAGCAAGCTAGCTGACCAGAAGTTGCTTCAAAGGATGAAGGCAAGTCTCCGTGCCGTTCGATGTGTGCTTGATAATGCTGAGCAGAAGCAGATCAAAGACCAAGAAGTTAAGAAATGGCTTGTTGACCTCCAAGATTCTCTCTATATGGCTGATGACTTGCTTGATGAACTCTCCACTAAAGCTGCTATTGCCACTCCCATTCAAACGGATCCAGGTAACTCTTCTTCCTGGACTCACTATGTTGATTCAATCTTAGAAGATAGTGATGATGCTGAGATGGGGATAGTAAATAGCATGCAAGACATAGTTCATAAATTGGAGTCTCTTGTTGAAGAGAAAGATGATCTTGGTCTAAAACAAGAGTTTGTCAAAGATGAGGAGGACATGTCATGGAGAATTCAATCATCTCTGGTTGAAACTTCTGAGATATATGGAAGGGATAATGACAAGAAAGCCATAATAGAATTGTTGTTAGATGATACTTGTGATGCTAACATATCTGTTATCCCCATTGTTGGTATGGGAGGAGTTGGAAAAACTACCTTGGCTCAGCTGGTTTACAATGATGCCAGAGTGGAGGGGGAATTTGACATTAGAGCATGGGTGTGTGTTTCCGACCAATTCGACATTGTTAATGTTACAAAAACCTTAATAAAAGCTGCAGGTGCTAGTTCTTGTAACGAGGATGATTTAAGTTTACTTCAAACTGGATTGAAGGATAAGTTAATGGGGAAGAAATTCTTAATTGTTTTGGATGATGTGTGGATTGATAATTCCAGAAGCTGGAAAAGTCTTCAAAAACCTTTTCAATATGGGAAAAAGGGAAGCAAGGTTCTTGTAACAACTCGAAATGATAATGTTGCCGATGTAGTGAAAACTATTTCAGCATATAAGCTTGGTTTATTGTCAGAGAAAGATTGTTGGTCATTTTTTGTGAAACGTGTATTTCTTTCTACTGCATCGAAGGAGTATTCAACTCTAGAATCGGTTGGTCGAGAACTTGTCAAAAAGTGCAAAGGGCTACCTTTGGCAGTAGAGGCCCTTGGTTCCTTATTACGTACAATAAATTATGATGGAAGGGATTGGGATAGTGTATTGAAAAGAGAACTATGGGAAGTTTTTGAAGATCAGAATGACGAGATTATTCCTGCATTAAGAATTAGCTATCATTATCTTCCTTCAAATCTAAAGTGA 1287 0.3916 MAAKFEGGAYLSSFVDAVLNRLSSVNSTPIASKLADQKLLQRMKASLRAVRCVLDNAEQKQIKDQEVKKWLVDLQDSLYMADDLLDELSTKAAIATPIQTDPGNSSSWTHYVDSILEDSDDAEMGIVNSMQDIVHKLESLVEEKDDLGLKQEFVKDEEDMSWRIQSSLVETSEIYGRDNDKKAIIELLLDDTCDANISVIPIVGMGGVGKTTLAQLVYNDARVEGEFDIRAWVCVSDQFDIVNVTKTLIKAAGASSCNEDDLSLLQTGLKDKLMGKKFLIVLDDVWIDNSRSWKSLQKPFQYGKKGSKVLVTTRNDNVADVVKTISAYKLGLLSEKDCWSFFVKRVFLSTASKEYSTLESVGRELVKKCKGLPLAVEALGSLLRTINYDGRDWDSVLKRELWEVFEDQNDEIIPALRISYHYLPSNLK* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1249 428 Gene3D - 15 121 - -
Amo17g1249 428 PRINTS Disease resistance protein signature 199 214 - -
Amo17g1249 428 PRINTS Disease resistance protein signature 272 286 - -
Amo17g1249 428 PRINTS Disease resistance protein signature 369 383 - -
Amo17g1249 428 PANTHER - 48 428 - -
Amo17g1249 428 Gene3D - 152 327 IPR027417 -
Amo17g1249 428 Gene3D - 332 423 IPR042197 -
Amo17g1249 428 Coils Coil 40 60 - -
Amo17g1249 428 Pfam Rx N-terminal domain 14 93 IPR041118 -
Amo17g1249 428 PANTHER DISEASE RESISTANCE PROTEIN RP 48 428 IPR044974 GO:0006952
Amo17g1249 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 428 IPR027417 -
Amo17g1249 428 Pfam NB-ARC domain 178 420 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1249 Amo-Chr17 37236501 37239450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1249 196 380 WRKY Transcription Factor Family AT5G45050 26.316 9.57e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1249 - - adu:107475166 630.943