Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g1230 ATGGAAAGGGATGTGTGTGATCTTTCTCCCACATGGGATTGTGAAAATGGCAATAATTCTGTGGAGAAGAGGCTAAGGCTATTTGGATTTGAGCTGAATCCACCTTCAAACAGTGTGAAAGATCCTAACACTACAGAAGGATCAGATGAAAGTGTGAATTCATCATCTAACTCAGTTTCTTTAGGAGGGGACAAAACCACAGCACAAGATCAAAGAACCACAACCACTAATAATAATAATGAGAAGAAGTTTGAGTGCCAATACTGTTTGAAGGAATTTGCAAATTCACAAGCACTTGGTGGGCACCAAAATGCTCACAAGAAAGAGAGGATGAAGAAGAAAAGGTTGCAGCTTCAAGCAAGGAAAGCCACCATAAACTACTATCTTCAACAGCCTAATTTCCCAAACAACAATCATTATCATGGTTTTTTTTACCATAATCAGAATCATAATAACAGTAACACACCTTGGTTCTATGATCCTTCTTCCTACAACTACTATTCTGACTTCACAGCTTGTGAAGAATCCCAAATTAGCTTTAACCCCAATGATCAAGATTCAAACTTTTTGATCGAAAAAGCATCCAATAGTAATTGGTATTCATCTCTACCATCATCATATCAAACTGCTTCTTCTTCACAGCAAGATTCTTGCATGTTCAATTTCTCTAATACTAGTACAGAAGATAATAATAATAATAGGGCTTACAACATCTTCAAGCCTTGCAACTTTCTTGATTCTTCAAATCATCAAATACAAAGCCATAATAGTAATAACAAAGCTTTAGATCTTCAATTAGGCCTCAATTTGCAGTCAAATACAAGAAGGGCCTAA 834 0.3621 MERDVCDLSPTWDCENGNNSVEKRLRLFGFELNPPSNSVKDPNTTEGSDESVNSSSNSVSLGGDKTTAQDQRTTTTNNNNEKKFECQYCLKEFANSQALGGHQNAHKKERMKKKRLQLQARKATINYYLQQPNFPNNNHYHGFFYHNQNHNNSNTPWFYDPSSYNYYSDFTACEESQISFNPNDQDSNFLIEKASNSNWYSSLPSSYQTASSSQQDSCMFNFSNTSTEDNNNNRAYNIFKPCNFLDSSNHQIQSHNSNNKALDLQLGLNLQSNTRRA* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g1230 277 MobiDBLite consensus disorder prediction 36 78 - -
Amo17g1230 277 PANTHER ZINC FINGER PROTEIN 5 18 271 IPR044299 GO:0010090
Amo17g1230 277 SUPERFAMILY beta-beta-alpha zinc fingers 80 111 IPR036236 -
Amo17g1230 277 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Amo17g1230 277 MobiDBLite consensus disorder prediction 31 78 - -
Amo17g1230 277 Gene3D Classic Zinc Finger 55 133 - -
Amo17g1230 277 Pfam C2H2-type zinc finger 84 109 - -
Amo17g1230 277 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Amo17g1230 277 PANTHER ZINC FINGER PROTEIN 5 18 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g1230 Amo-Chr17 35958451 35959482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g1230 24 127 C2H2 Transcription Factor Family AT1G68360 42.478 2.21e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g1230 - - adu:107488933 521.161